Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.99■□□□□ 0.63
CTPS1P17812 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.99■□□□□ 0.63
CTPS1P17812 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.99■□□□□ 0.63
CTPS1P17812 AC145285.6-201ENST00000604632 637 ntBASIC18.99■□□□□ 0.63
CTPS1P17812 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.99■□□□□ 0.63
CTPS1P17812 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTPS1P17812 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.99■□□□□ 0.63
CTPS1P17812 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.98■□□□□ 0.63
CTPS1P17812 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTPS1P17812 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.98■□□□□ 0.63
CTPS1P17812 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 TSPY17P-201ENST00000450329 467 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 AC128688.1-201ENST00000487626 519 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 AP003041.3-201ENST00000527151 707 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.98■□□□□ 0.63
CTPS1P17812 AL353719.1-201ENST00000566847 864 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.98■□□□□ 0.63
CTPS1P17812 LINC01023-201ENST00000606054 436 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 AC012306.2-201ENST00000609350 630 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CTPS1P17812 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.98■□□□□ 0.63
CTPS1P17812 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 AC092338.2-201ENST00000568827 1415 ntBASIC18.98■□□□□ 0.63
CTPS1P17812 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTPS1P17812 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CTPS1P17812 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CTPS1P17812 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.97■□□□□ 0.63
CTPS1P17812 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 AC097493.4-201ENST00000641197 219 ntBASIC18.97■□□□□ 0.63
CTPS1P17812 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 KRT8P3-201ENST00000519669 1449 ntBASIC18.97■□□□□ 0.63
CTPS1P17812 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.97■□□□□ 0.63
CTPS1P17812 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 KRT18P22-201ENST00000402024 1347 ntBASIC18.97■□□□□ 0.63
CTPS1P17812 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CTPS1P17812 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTPS1P17812 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 AC087289.5-201ENST00000586076 3175 ntBASIC18.96■□□□□ 0.63
CTPS1P17812 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.96■□□□□ 0.63
CTPS1P17812 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.96■□□□□ 0.63
CTPS1P17812 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.96■□□□□ 0.63
CTPS1P17812 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 MIR4674-201ENST00000582457 87 ntBASIC18.96■□□□□ 0.63
CTPS1P17812 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CTPS1P17812 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.96■□□□□ 0.63
CTPS1P17812 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTPS1P17812 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CTPS1P17812 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.96■□□□□ 0.63
CTPS1P17812 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTPS1P17812 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTPS1P17812 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTPS1P17812 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.95■□□□□ 0.62
CTPS1P17812 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.95■□□□□ 0.62
CTPS1P17812 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CTPS1P17812 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms