Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT3P12035 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
KRT3P12035 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
KRT3P12035 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
KRT3P12035 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
KRT3P12035 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT3P12035 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
KRT3P12035 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT3P12035 MIR718-201ENST00000390190 70 ntBASIC19.9■□□□□ 0.78
KRT3P12035 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 AL355355.2-201ENST00000442321 338 ntBASIC19.9■□□□□ 0.78
KRT3P12035 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT3P12035 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT3P12035 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT3P12035 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.9■□□□□ 0.78
KRT3P12035 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.9■□□□□ 0.78
KRT3P12035 AC083906.6-201ENST00000641366 219 ntBASIC19.9■□□□□ 0.78
KRT3P12035 AP006294.2-201ENST00000641667 209 ntBASIC19.9■□□□□ 0.78
KRT3P12035 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.9■□□□□ 0.78
KRT3P12035 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
KRT3P12035 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
KRT3P12035 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KRT3P12035 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
KRT3P12035 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.89■□□□□ 0.78
KRT3P12035 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
KRT3P12035 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
KRT3P12035 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
KRT3P12035 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT3P12035 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.89■□□□□ 0.77
KRT3P12035 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.89■□□□□ 0.77
KRT3P12035 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
KRT3P12035 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
KRT3P12035 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
KRT3P12035 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
KRT3P12035 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
KRT3P12035 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.88■□□□□ 0.77
KRT3P12035 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 AC093525.10-201ENST00000625130 1569 ntBASIC19.88■□□□□ 0.77
KRT3P12035 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
KRT3P12035 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
KRT3P12035 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.88■□□□□ 0.77
KRT3P12035 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.88■□□□□ 0.77
KRT3P12035 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.88■□□□□ 0.77
KRT3P12035 AC026471.5-201ENST00000615068 467 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms