Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.84■□□□□ 0.77
RARAP10276 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.84■□□□□ 0.77
RARAP10276 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.84■□□□□ 0.77
RARAP10276 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RARAP10276 AL353807.1-201ENST00000427475 662 ntBASIC19.84■□□□□ 0.77
RARAP10276 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.84■□□□□ 0.77
RARAP10276 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.84■□□□□ 0.77
RARAP10276 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.84■□□□□ 0.77
RARAP10276 AF186192.3-201ENST00000583427 947 ntBASIC19.84■□□□□ 0.77
RARAP10276 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.84■□□□□ 0.77
RARAP10276 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.84■□□□□ 0.77
RARAP10276 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.84■□□□□ 0.77
RARAP10276 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RARAP10276 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.84■□□□□ 0.77
RARAP10276 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.83■□□□□ 0.77
RARAP10276 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.83■□□□□ 0.77
RARAP10276 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RARAP10276 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RARAP10276 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RARAP10276 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.83■□□□□ 0.77
RARAP10276 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.83■□□□□ 0.77
RARAP10276 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RARAP10276 AC142381.4-202ENST00000563973 229 ntBASIC19.83■□□□□ 0.77
RARAP10276 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RARAP10276 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RARAP10276 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.83■□□□□ 0.76
RARAP10276 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
RARAP10276 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RARAP10276 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
RARAP10276 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.83■□□□□ 0.76
RARAP10276 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.83■□□□□ 0.76
RARAP10276 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.83■□□□□ 0.76
RARAP10276 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RARAP10276 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
RARAP10276 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 AL390961.4-201ENST00000623958 2535 ntBASIC19.82■□□□□ 0.76
RARAP10276 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
RARAP10276 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.82■□□□□ 0.76
RARAP10276 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.82■□□□□ 0.76
RARAP10276 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.82■□□□□ 0.76
RARAP10276 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.82■□□□□ 0.76
RARAP10276 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.82■□□□□ 0.76
RARAP10276 CR392000.1-201ENST00000624770 1228 ntBASIC19.82■□□□□ 0.76
RARAP10276 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
RARAP10276 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RARAP10276 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
RARAP10276 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.81■□□□□ 0.76
RARAP10276 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.81■□□□□ 0.76
RARAP10276 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.81■□□□□ 0.76
RARAP10276 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RARAP10276 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.81■□□□□ 0.76
RARAP10276 AC073195.1-201ENST00000607241 877 ntBASIC19.81■□□□□ 0.76
RARAP10276 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 KRT16P1-201ENST00000399124 1418 ntBASIC19.81■□□□□ 0.76
RARAP10276 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.81■□□□□ 0.76
RARAP10276 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RARAP10276 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RARAP10276 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms