Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.93■□□□□ 0.94
MMP3P08254 AC093525.10-201ENST00000625130 1569 ntBASIC20.93■□□□□ 0.94
MMP3P08254 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP3P08254 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
MMP3P08254 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
MMP3P08254 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MMP3P08254 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 MIR662-201ENST00000384847 95 ntBASIC20.92■□□□□ 0.94
MMP3P08254 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.92■□□□□ 0.94
MMP3P08254 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.92■□□□□ 0.94
MMP3P08254 TPM4P1-201ENST00000436100 807 ntBASIC20.92■□□□□ 0.94
MMP3P08254 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 FEM1AP3-201ENST00000403722 1741 ntBASIC20.92■□□□□ 0.94
MMP3P08254 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MMP3P08254 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP3P08254 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP3P08254 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP3P08254 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP3P08254 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP3P08254 IRX1P1-201ENST00000438849 1838 ntBASIC20.91■□□□□ 0.94
MMP3P08254 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.91■□□□□ 0.94
MMP3P08254 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
MMP3P08254 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MMP3P08254 KRT8P7-201ENST00000533003 1432 ntBASIC20.91■□□□□ 0.94
MMP3P08254 AC104390.1-201ENST00000555663 520 ntBASIC20.91■□□□□ 0.94
MMP3P08254 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP3P08254 HOXB1-202ENST00000577092 1414 ntBASIC20.91■□□□□ 0.94
MMP3P08254 MIR3652-201ENST00000579335 131 ntBASIC20.91■□□□□ 0.94
MMP3P08254 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.9■□□□□ 0.94
MMP3P08254 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MMP3P08254 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP3P08254 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.9■□□□□ 0.94
MMP3P08254 KRT8P26-201ENST00000534154 1276 ntBASIC20.9■□□□□ 0.94
MMP3P08254 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
MMP3P08254 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.9■□□□□ 0.94
MMP3P08254 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.9■□□□□ 0.94
MMP3P08254 AC010240.3-201ENST00000607688 395 ntBASIC20.9■□□□□ 0.94
MMP3P08254 AL691432.3-201ENST00000621860 400 ntBASIC20.9■□□□□ 0.94
MMP3P08254 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP3P08254 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
MMP3P08254 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.89■□□□□ 0.94
MMP3P08254 KRT8P32-201ENST00000512863 1461 ntBASIC20.89■□□□□ 0.94
MMP3P08254 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP3P08254 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MMP3P08254 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MMP3P08254 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MMP3P08254 MIR564-202ENST00000385049 94 ntBASIC20.89■□□□□ 0.93
MMP3P08254 AC026396.1-201ENST00000419388 421 ntBASIC20.89■□□□□ 0.93
MMP3P08254 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP3P08254 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP3P08254 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP3P08254 AP002414.4-201ENST00000589764 1148 ntBASIC20.89■□□□□ 0.93
MMP3P08254 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms