Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DRAP01903 CROCCP3-202ENST00000420820 1947 ntBASIC20.32■□□□□ 0.84
HLA-DRAP01903 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.32■□□□□ 0.84
HLA-DRAP01903 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DRAP01903 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.32■□□□□ 0.84
HLA-DRAP01903 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.32■□□□□ 0.84
HLA-DRAP01903 C2orf69P3-201ENST00000565542 1120 ntBASIC20.32■□□□□ 0.84
HLA-DRAP01903 AC010947.1-201ENST00000623454 693 ntBASIC20.32■□□□□ 0.84
HLA-DRAP01903 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DRAP01903 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
HLA-DRAP01903 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.32■□□□□ 0.84
HLA-DRAP01903 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HLA-DRAP01903 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
HLA-DRAP01903 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 SLC25A1P2-201ENST00000430693 912 ntBASIC20.3■□□□□ 0.84
HLA-DRAP01903 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 AC068587.9-201ENST00000641814 219 ntBASIC20.3■□□□□ 0.84
HLA-DRAP01903 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 AC093503.3-201ENST00000624917 2352 ntBASIC20.3■□□□□ 0.84
HLA-DRAP01903 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HLA-DRAP01903 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.3■□□□□ 0.84
HLA-DRAP01903 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 HEIH-201ENST00000623091 1652 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 RCC2P3-201ENST00000418112 1537 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 TSPY14P-201ENST00000303979 915 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 INGX-201ENST00000359239 846 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 NAPSB-206ENST00000562112 1266 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.29■□□□□ 0.84
HLA-DRAP01903 AC004408.2-201ENST00000623613 2777 ntBASIC20.29■□□□□ 0.84
HLA-DRAP01903 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HLA-DRAP01903 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.28■□□□□ 0.84
HLA-DRAP01903 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HLA-DRAP01903 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.28■□□□□ 0.84
HLA-DRAP01903 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HLA-DRAP01903 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.28■□□□□ 0.84
HLA-DRAP01903 AL023284.2-201ENST00000405850 579 ntBASIC20.28■□□□□ 0.84
HLA-DRAP01903 AC087499.1-201ENST00000418141 1075 ntBASIC20.28■□□□□ 0.84
HLA-DRAP01903 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.28■□□□□ 0.84
HLA-DRAP01903 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms