Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDGFBP01127 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.99■□□□□ 0.63
PDGFBP01127 AP001160.2-201ENST00000596071 487 ntBASIC18.99■□□□□ 0.63
PDGFBP01127 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFBP01127 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
PDGFBP01127 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.99■□□□□ 0.63
PDGFBP01127 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDGFBP01127 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDGFBP01127 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFBP01127 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDGFBP01127 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
PDGFBP01127 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PDGFBP01127 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 IGHGP-201ENST00000390555 1178 ntBASIC18.98■□□□□ 0.63
PDGFBP01127 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.98■□□□□ 0.63
PDGFBP01127 KRT18P23-201ENST00000435622 1283 ntBASIC18.98■□□□□ 0.63
PDGFBP01127 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFBP01127 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.98■□□□□ 0.63
PDGFBP01127 GUSBP12-201ENST00000513727 720 ntBASIC18.98■□□□□ 0.63
PDGFBP01127 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.98■□□□□ 0.63
PDGFBP01127 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.98■□□□□ 0.63
PDGFBP01127 FAM215A-202ENST00000632077 792 ntBASIC18.98■□□□□ 0.63
PDGFBP01127 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDGFBP01127 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.97■□□□□ 0.63
PDGFBP01127 AL691432.2-201ENST00000607222 2038 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.97■□□□□ 0.63
PDGFBP01127 UPF3AP3-201ENST00000420996 769 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 HNRNPDP1-201ENST00000439535 754 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.97■□□□□ 0.63
PDGFBP01127 VENTXP7-201ENST00000475503 772 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.97■□□□□ 0.63
PDGFBP01127 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 AL591684.3-201ENST00000605187 298 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 AC008608.2-201ENST00000606089 416 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 AC116407.3-201ENST00000623905 1129 ntBASIC18.97■□□□□ 0.63
PDGFBP01127 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDGFBP01127 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
PDGFBP01127 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDGFBP01127 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.97■□□□□ 0.63
PDGFBP01127 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.96■□□□□ 0.63
PDGFBP01127 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDGFBP01127 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PDGFBP01127 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PDGFBP01127 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDGFBP01127 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDGFBP01127 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.95■□□□□ 0.62
PDGFBP01127 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms