Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX6O95475 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SIX6O95475 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SIX6O95475 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.83■□□□□ 0.13
SIX6O95475 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.83■□□□□ 0.13
SIX6O95475 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX6O95475 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX6O95475 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SIX6O95475 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.83■□□□□ 0.13
SIX6O95475 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SIX6O95475 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SIX6O95475 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.83■□□□□ 0.12
SIX6O95475 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.83■□□□□ 0.12
SIX6O95475 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SIX6O95475 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SIX6O95475 GUSBP5-201ENST00000418136 578 ntBASIC15.83■□□□□ 0.12
SIX6O95475 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC15.83■□□□□ 0.12
SIX6O95475 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.83■□□□□ 0.12
SIX6O95475 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX6O95475 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.83■□□□□ 0.12
SIX6O95475 AC046158.3-201ENST00000624947 2558 ntBASIC15.83■□□□□ 0.12
SIX6O95475 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SIX6O95475 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 AL645608.8-201ENST00000606034 2086 ntBASIC15.83■□□□□ 0.12
SIX6O95475 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SIX6O95475 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.82■□□□□ 0.12
SIX6O95475 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX6O95475 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX6O95475 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX6O95475 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX6O95475 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX6O95475 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.82■□□□□ 0.12
SIX6O95475 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX6O95475 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SIX6O95475 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.82■□□□□ 0.12
SIX6O95475 AL136162.1-201ENST00000607711 1078 ntBASIC15.82■□□□□ 0.12
SIX6O95475 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
SIX6O95475 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.82■□□□□ 0.12
SIX6O95475 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SIX6O95475 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.81■□□□□ 0.12
SIX6O95475 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.81■□□□□ 0.12
SIX6O95475 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.81■□□□□ 0.12
SIX6O95475 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SIX6O95475 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SIX6O95475 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms