Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
PCDH8O95206 CR769767.2-201ENST00000622735 460 ntBASIC18.89■□□□□ 0.61
PCDH8O95206 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.89■□□□□ 0.61
PCDH8O95206 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH8O95206 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PCDH8O95206 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
PCDH8O95206 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH8O95206 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH8O95206 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH8O95206 NEK4P2-201ENST00000580004 1012 ntBASIC18.88■□□□□ 0.61
PCDH8O95206 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.88■□□□□ 0.61
PCDH8O95206 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH8O95206 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 TEX21P-204ENST00000641479 1693 ntBASIC18.88■□□□□ 0.61
PCDH8O95206 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PCDH8O95206 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH8O95206 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.88■□□□□ 0.61
PCDH8O95206 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.88■□□□□ 0.61
PCDH8O95206 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH8O95206 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PCDH8O95206 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH8O95206 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH8O95206 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH8O95206 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH8O95206 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.87■□□□□ 0.61
PCDH8O95206 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH8O95206 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH8O95206 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH8O95206 AL023284.2-201ENST00000405850 579 ntBASIC18.86■□□□□ 0.61
PCDH8O95206 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 MCCD1P1-208ENST00000445732 328 ntBASIC18.86■□□□□ 0.61
PCDH8O95206 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH8O95206 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PCDH8O95206 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH8O95206 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH8O95206 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH8O95206 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH8O95206 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDH8O95206 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH8O95206 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH8O95206 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH8O95206 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH8O95206 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH8O95206 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH8O95206 KRT8P3-201ENST00000519669 1449 ntBASIC18.85■□□□□ 0.61
PCDH8O95206 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH8O95206 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH8O95206 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH8O95206 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH8O95206 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH8O95206 AL031133.1-201ENST00000406807 723 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms