Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC104076.2-201ENST00000448912 469 ntBASIC19.9■□□□□ 0.78
RTN3O95197 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN3O95197 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN3O95197 AC141257.4-201ENST00000634557 245 ntBASIC19.9■□□□□ 0.78
RTN3O95197 AC136944.6-201ENST00000634818 245 ntBASIC19.9■□□□□ 0.78
RTN3O95197 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTN3O95197 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.9■□□□□ 0.78
RTN3O95197 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RTN3O95197 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
RTN3O95197 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RTN3O95197 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RTN3O95197 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RTN3O95197 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RTN3O95197 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
RTN3O95197 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.89■□□□□ 0.78
RTN3O95197 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN3O95197 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.89■□□□□ 0.77
RTN3O95197 KRT8P3-201ENST00000519669 1449 ntBASIC19.89■□□□□ 0.77
RTN3O95197 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 AFG3L1P-217ENST00000557444 2447 ntBASIC19.89■□□□□ 0.77
RTN3O95197 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.89■□□□□ 0.77
RTN3O95197 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RTN3O95197 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.89■□□□□ 0.77
RTN3O95197 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.89■□□□□ 0.77
RTN3O95197 AC006011.2-201ENST00000621313 1158 ntBASIC19.89■□□□□ 0.77
RTN3O95197 AL590326.2-201ENST00000625139 305 ntBASIC19.89■□□□□ 0.77
RTN3O95197 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RTN3O95197 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTN3O95197 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.88■□□□□ 0.77
RTN3O95197 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RTN3O95197 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.88■□□□□ 0.77
RTN3O95197 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN3O95197 DUX4L26-201ENST00000489078 1255 ntBASIC19.88■□□□□ 0.77
RTN3O95197 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RTN3O95197 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.88■□□□□ 0.77
RTN3O95197 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN3O95197 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.88■□□□□ 0.77
RTN3O95197 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RTN3O95197 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
RTN3O95197 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RTN3O95197 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 KRT8P45-201ENST00000414328 1447 ntBASIC19.87■□□□□ 0.77
RTN3O95197 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTN3O95197 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RTN3O95197 AK4P3-201ENST00000418260 669 ntBASIC19.87■□□□□ 0.77
RTN3O95197 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
RTN3O95197 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RTN3O95197 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 COX11P1-201ENST00000489116 835 ntBASIC19.87■□□□□ 0.77
RTN3O95197 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.87■□□□□ 0.77
RTN3O95197 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.87■□□□□ 0.77
RTN3O95197 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
RTN3O95197 AL031432.5-201ENST00000641059 760 ntBASIC19.87■□□□□ 0.77
RTN3O95197 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RTN3O95197 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms