Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 AC120498.9-201ENST00000339021 3867 ntBASIC18.19■□□□□ 0.5
PRAMEF4O60810 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.19■□□□□ 0.5
PRAMEF4O60810 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF4O60810 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 AP003071.4-201ENST00000562276 1284 ntBASIC18.18■□□□□ 0.5
PRAMEF4O60810 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 AP001412.1-201ENST00000608405 714 ntBASIC18.18■□□□□ 0.5
PRAMEF4O60810 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF4O60810 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF4O60810 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF4O60810 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 MFAP1P1-201ENST00000442257 1255 ntBASIC18.16■□□□□ 0.5
PRAMEF4O60810 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF4O60810 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.16■□□□□ 0.5
PRAMEF4O60810 SLC25A1P4-201ENST00000567977 778 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms