Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC138761.1-201ENST00000584393 385 ntBASIC18.35■□□□□ 0.53
GFRA3O60609 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GFRA3O60609 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GFRA3O60609 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.34■□□□□ 0.53
GFRA3O60609 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 AC063926.2-201ENST00000623766 1308 ntBASIC18.34■□□□□ 0.53
GFRA3O60609 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.34■□□□□ 0.53
GFRA3O60609 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.34■□□□□ 0.53
GFRA3O60609 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.34■□□□□ 0.53
GFRA3O60609 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
GFRA3O60609 AC190387.1-201ENST00000551683 408 ntBASIC18.34■□□□□ 0.53
GFRA3O60609 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.34■□□□□ 0.53
GFRA3O60609 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
GFRA3O60609 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.34■□□□□ 0.53
GFRA3O60609 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GFRA3O60609 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.34■□□□□ 0.53
GFRA3O60609 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GFRA3O60609 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GFRA3O60609 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.33■□□□□ 0.53
GFRA3O60609 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GFRA3O60609 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GFRA3O60609 C1orf229-201ENST00000623686 2258 ntBASIC18.33■□□□□ 0.53
GFRA3O60609 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.33■□□□□ 0.53
GFRA3O60609 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.33■□□□□ 0.52
GFRA3O60609 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
GFRA3O60609 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.33■□□□□ 0.52
GFRA3O60609 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GFRA3O60609 CNN2P11-201ENST00000429351 262 ntBASIC18.33■□□□□ 0.52
GFRA3O60609 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.33■□□□□ 0.52
GFRA3O60609 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.33■□□□□ 0.52
GFRA3O60609 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.33■□□□□ 0.52
GFRA3O60609 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GFRA3O60609 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.33■□□□□ 0.52
GFRA3O60609 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.33■□□□□ 0.52
GFRA3O60609 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.33■□□□□ 0.52
GFRA3O60609 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
GFRA3O60609 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.33■□□□□ 0.52
GFRA3O60609 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.33■□□□□ 0.52
GFRA3O60609 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GFRA3O60609 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GFRA3O60609 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.32■□□□□ 0.52
GFRA3O60609 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
GFRA3O60609 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 AC021087.4-201ENST00000563761 564 ntBASIC18.32■□□□□ 0.52
GFRA3O60609 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 MIR4469-201ENST00000583919 79 ntBASIC18.32■□□□□ 0.52
GFRA3O60609 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GFRA3O60609 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
GFRA3O60609 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.32■□□□□ 0.52
GFRA3O60609 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GFRA3O60609 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
GFRA3O60609 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
GFRA3O60609 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GFRA3O60609 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.31■□□□□ 0.52
GFRA3O60609 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.31■□□□□ 0.52
GFRA3O60609 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GFRA3O60609 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms