Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.82■□□□□ 0.6
PHGDHO43175 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PHGDHO43175 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.82■□□□□ 0.6
PHGDHO43175 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PHGDHO43175 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.82■□□□□ 0.6
PHGDHO43175 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PHGDHO43175 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 ESRRAP1-201ENST00000400596 1257 ntBASIC18.81■□□□□ 0.6
PHGDHO43175 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PHGDHO43175 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.81■□□□□ 0.6
PHGDHO43175 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
PHGDHO43175 KRT18P6-201ENST00000555540 1265 ntBASIC18.81■□□□□ 0.6
PHGDHO43175 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.81■□□□□ 0.6
PHGDHO43175 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PHGDHO43175 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.81■□□□□ 0.6
PHGDHO43175 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PHGDHO43175 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PHGDHO43175 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PHGDHO43175 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 Z85996.1-201ENST00000494644 937 ntBASIC18.8■□□□□ 0.6
PHGDHO43175 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.8■□□□□ 0.6
PHGDHO43175 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.8■□□□□ 0.6
PHGDHO43175 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.8■□□□□ 0.6
PHGDHO43175 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PHGDHO43175 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.8■□□□□ 0.6
PHGDHO43175 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.8■□□□□ 0.6
PHGDHO43175 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
PHGDHO43175 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.79■□□□□ 0.6
PHGDHO43175 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.79■□□□□ 0.6
PHGDHO43175 KRT16P5-201ENST00000455284 522 ntBASIC18.79■□□□□ 0.6
PHGDHO43175 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.79■□□□□ 0.6
PHGDHO43175 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.79■□□□□ 0.6
PHGDHO43175 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.79■□□□□ 0.6
PHGDHO43175 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PHGDHO43175 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PHGDHO43175 AC018470.1-201ENST00000624790 3129 ntBASIC18.78■□□□□ 0.6
PHGDHO43175 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms