Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 POLD2P1-201ENST00000511220 997 ntBASIC22.57■■□□□ 1.2
FOXN1O15353 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.57■■□□□ 1.2
FOXN1O15353 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.57■■□□□ 1.2
FOXN1O15353 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.57■■□□□ 1.2
FOXN1O15353 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC22.57■■□□□ 1.2
FOXN1O15353 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
FOXN1O15353 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
FOXN1O15353 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.57■■□□□ 1.2
FOXN1O15353 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
FOXN1O15353 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
FOXN1O15353 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
FOXN1O15353 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC22.56■■□□□ 1.2
FOXN1O15353 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.56■■□□□ 1.2
FOXN1O15353 RASA4DP-201ENST00000460726 1199 ntBASIC22.56■■□□□ 1.2
FOXN1O15353 CA15P1-201ENST00000481698 905 ntBASIC22.56■■□□□ 1.2
FOXN1O15353 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC22.56■■□□□ 1.2
FOXN1O15353 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC22.56■■□□□ 1.2
FOXN1O15353 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.56■■□□□ 1.2
FOXN1O15353 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
FOXN1O15353 AL691403.2-201ENST00000618460 490 ntBASIC22.56■■□□□ 1.2
FOXN1O15353 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.56■■□□□ 1.2
FOXN1O15353 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
FOXN1O15353 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXN1O15353 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 TUBB8P6-201ENST00000436895 1288 ntBASIC22.55■■□□□ 1.2
FOXN1O15353 KRT16P4-201ENST00000453883 522 ntBASIC22.55■■□□□ 1.2
FOXN1O15353 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.55■■□□□ 1.2
FOXN1O15353 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXN1O15353 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXN1O15353 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC22.55■■□□□ 1.2
FOXN1O15353 NEK4P2-201ENST00000580004 1012 ntBASIC22.55■■□□□ 1.2
FOXN1O15353 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.55■■□□□ 1.2
FOXN1O15353 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
FOXN1O15353 PTBP1P-201ENST00000554374 1601 ntBASIC22.55■■□□□ 1.2
FOXN1O15353 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
FOXN1O15353 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.54■■□□□ 1.2
FOXN1O15353 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.54■■□□□ 1.2
FOXN1O15353 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 AC092597.1-201ENST00000487352 616 ntBASIC22.54■■□□□ 1.2
FOXN1O15353 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.54■■□□□ 1.2
FOXN1O15353 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXN1O15353 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.54■■□□□ 1.2
FOXN1O15353 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.54■■□□□ 1.2
FOXN1O15353 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXN1O15353 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC22.54■■□□□ 1.2
FOXN1O15353 HLA-A-209ENST00000638375 975 ntBASIC22.54■■□□□ 1.2
FOXN1O15353 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
FOXN1O15353 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.54■■□□□ 1.2
FOXN1O15353 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
FOXN1O15353 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.53■■□□□ 1.2
FOXN1O15353 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
FOXN1O15353 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC22.53■■□□□ 1.2
FOXN1O15353 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.53■■□□□ 1.2
FOXN1O15353 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
FOXN1O15353 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
FOXN1O15353 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms