Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFRD1O00458 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
IFRD1O00458 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.67■□□□□ 0.58
IFRD1O00458 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.67■□□□□ 0.58
IFRD1O00458 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFRD1O00458 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.67■□□□□ 0.58
IFRD1O00458 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IFRD1O00458 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFRD1O00458 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.67■□□□□ 0.58
IFRD1O00458 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IFRD1O00458 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
IFRD1O00458 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
IFRD1O00458 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.66■□□□□ 0.58
IFRD1O00458 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.66■□□□□ 0.58
IFRD1O00458 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.66■□□□□ 0.58
IFRD1O00458 CKBP1-201ENST00000565489 1086 ntBASIC18.66■□□□□ 0.58
IFRD1O00458 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.66■□□□□ 0.58
IFRD1O00458 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IFRD1O00458 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.66■□□□□ 0.58
IFRD1O00458 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFRD1O00458 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IFRD1O00458 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
IFRD1O00458 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 AL390955.1-201ENST00000428694 934 ntBASIC18.65■□□□□ 0.58
IFRD1O00458 TSPY23P-201ENST00000440136 739 ntBASIC18.65■□□□□ 0.58
IFRD1O00458 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.65■□□□□ 0.58
IFRD1O00458 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
IFRD1O00458 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IFRD1O00458 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.65■□□□□ 0.58
IFRD1O00458 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
IFRD1O00458 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFRD1O00458 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFRD1O00458 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
IFRD1O00458 BCL2-203ENST00000589955 5011 ntBASIC18.64■□□□□ 0.58
IFRD1O00458 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFRD1O00458 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
IFRD1O00458 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.64■□□□□ 0.57
IFRD1O00458 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.64■□□□□ 0.57
IFRD1O00458 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
IFRD1O00458 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.64■□□□□ 0.57
IFRD1O00458 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFRD1O00458 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.64■□□□□ 0.57
IFRD1O00458 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms