Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC091076.1-201ENST00000610741 619 ntBASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.94■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 IRX1P1-201ENST00000438849 1838 ntBASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 STARP1-201ENST00000397973 869 ntBASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC034232.1-201ENST00000506026 1064 ntBASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AL121956.5-201ENST00000625261 221 ntBASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FP475955.4-201ENST00000623131 1990 ntBASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.93■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AL512353.2-201ENST00000448759 1962 ntBASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RCC2P3-201ENST00000418112 1537 ntBASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.92■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 KRT18P38-201ENST00000449496 1282 ntBASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
C1QTNF3-AMACRE9PGA6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms