Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SPDYE4A6NLX3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPDYE4A6NLX3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SPDYE4A6NLX3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SPDYE4A6NLX3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 CD177P1-201ENST00000606252 935 ntBASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 AL121829.2-201ENST00000620908 328 ntBASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDYE4A6NLX3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC124283.5-201ENST00000624661 1809 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 KRT16P5-201ENST00000455284 522 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AF186192.3-201ENST00000583427 947 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AL133445.2-201ENST00000611191 527 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 AL121906.2-201ENST00000621597 723 ntBASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDYE4A6NLX3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 AC004264.1-201ENST00000608354 794 ntBASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 AC011484.1-201ENST00000377652 1995 ntBASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDYE4A6NLX3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms