Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 LINC01311-201ENST00000565162 1445 ntBASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 AC005332.1-201ENST00000577698 1310 ntBASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 ZNF444P1-201ENST00000559497 298 ntBASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 AC024243.1-201ENST00000609234 778 ntBASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.82■□□□□ 0.6
TBC1D3FA6NER0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 MIR3180-5-201ENST00000583743 153 ntBASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 AC093458.2-201ENST00000623150 629 ntBASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 SLC25A24-204ENST00000569674 2357 ntBASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.81■□□□□ 0.6
TBC1D3FA6NER0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 SPDYE15P-201ENST00000424157 909 ntBASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 AC034232.1-201ENST00000506026 1064 ntBASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 AL136038.3-201ENST00000561909 1096 ntBASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TBC1D3FA6NER0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 TEX21P-204ENST00000641479 1693 ntBASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TBC1D3FA6NER0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms