Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL135938.1-201ENST00000443141 297 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 Y_RNA.649-201ENST00000459077 103 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 RN7SL633P-201ENST00000488974 297 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.16□□□□□ -1.9
CNTN3Q9P232 RNU6-693P-201ENST00000516134 107 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 RNA5SP236-201ENST00000516169 116 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 RN7SKP43-201ENST00000516173 320 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 AC007536.1-201ENST00000533382 349 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 MIR3613-201ENST00000579844 87 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.16□□□□□ -1.9
CNTN3Q9P232 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CNTN3Q9P232 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNTN3Q9P232 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CNTN3Q9P232 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CNTN3Q9P232 SNORA8-201ENST00000384574 139 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 AL117342.1-201ENST00000404861 406 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 RNA5SP492-201ENST00000411330 114 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.15□□□□□ -1.91
CNTN3Q9P232 AC009238.1-201ENST00000442165 424 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 AC009237.6-201ENST00000446969 424 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.15□□□□□ -1.91
CNTN3Q9P232 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 Y_RNA.666-201ENST00000516187 112 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 SCARNA13-201ENST00000516672 275 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 RNU6-1270P-201ENST00000517128 108 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 AC091544.4-201ENST00000555268 342 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
CNTN3Q9P232 AL591926.4-201ENST00000616895 298 ntBASIC3.15□□□□□ -1.91
CNTN3Q9P232 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CNTN3Q9P232 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CNTN3Q9P232 Y_RNA.35-201ENST00000362601 101 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 SNORD114-6-201ENST00000364393 72 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 RNU6-1164P-201ENST00000364428 107 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 MIR522-201ENST00000385071 87 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 MIR802-201ENST00000390235 94 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 RN7SKP284-201ENST00000411002 343 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.14□□□□□ -1.91
CNTN3Q9P232 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.14□□□□□ -1.91
CNTN3Q9P232 MTND5P18-201ENST00000445624 1801 ntBASIC3.14□□□□□ -1.91
CNTN3Q9P232 MIR7106-201ENST00000612419 65 ntBASIC3.13□□□□□ -1.91
CNTN3Q9P232 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CNTN3Q9P232 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.12□□□□□ -1.91
CNTN3Q9P232 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CNTN3Q9P232 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CNTN3Q9P232 SNORA1B-201ENST00000362535 133 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 Y_RNA.309-201ENST00000365046 111 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 RNU6-147P-201ENST00000383983 107 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 RNU6-1072P-201ENST00000384703 107 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 RNU6-443P-201ENST00000384780 107 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 SNORD77.3-201ENST00000391113 65 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 RNA5SP136-201ENST00000410906 107 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 AC007064.1-201ENST00000412238 351 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 RNU7-26P-201ENST00000458980 63 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 MIR4762-201ENST00000585261 75 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 AC022217.4-201ENST00000604389 163 ntBASIC3.12□□□□□ -1.91
CNTN3Q9P232 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CNTN3Q9P232 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CNTN3Q9P232 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTN3Q9P232 Y_RNA.43-201ENST00000362670 111 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 U8.9-201ENST00000365667 134 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 Y_RNA.410-201ENST00000383992 113 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 MIR548A2-201ENST00000384956 97 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 RNA5SP367-201ENST00000516557 118 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 RNU6-1149P-201ENST00000516810 97 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 AC134878.1-201ENST00000619901 243 ntBASIC3.11□□□□□ -1.91
CNTN3Q9P232 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTN3Q9P232 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CNTN3Q9P232 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.11□□□□□ -1.91
CNTN3Q9P232 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CNTN3Q9P232 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CNTN3Q9P232 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CNTN3Q9P232 RNU6-1298P-201ENST00000362456 101 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 RNU6-442P-201ENST00000383968 104 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 MIR548A1-201ENST00000385041 97 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.1□□□□□ -1.91
CNTN3Q9P232 AL163195.1-201ENST00000496941 348 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 RNU6-412P-201ENST00000516434 106 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 AC006441.5-201ENST00000612680 209 ntBASIC3.1□□□□□ -1.91
CNTN3Q9P232 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.1□□□□□ -1.91
CNTN3Q9P232 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CNTN3Q9P232 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CNTN3Q9P232 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.1□□□□□ -1.91
CNTN3Q9P232 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CNTN3Q9P232 U8.5-201ENST00000364528 136 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 Y_RNA.510-201ENST00000384511 114 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 MIR518F-201ENST00000384973 87 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 MIR1263-201ENST00000408324 86 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 AC105272.1-201ENST00000438604 198 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 AP004217.1-201ENST00000480579 346 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 SCARNA15-202ENST00000516881 127 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 RNA5SP170-201ENST00000517150 101 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 MIR5197-201ENST00000583721 112 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 ELOCP29-201ENST00000588193 334 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.09□□□□□ -1.91
CNTN3Q9P232 CTSLP2-204ENST00000629029 392 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms