Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNU1-72P-201ENST00000362976 153 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 RNU6-1138P-201ENST00000365359 106 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 Y_RNA.369-201ENST00000365568 117 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 Y_RNA.549-201ENST00000384657 102 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 RNU2-32P-201ENST00000411193 191 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.44□□□□□ -1.86
EFCC1Q9HA90 SNORD109B-201ENST00000458961 67 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 SNORD109A-201ENST00000459128 67 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 CKS1BP2-201ENST00000497342 240 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 SNORA4.4-201ENST00000515921 135 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 RNU6-991P-201ENST00000516168 107 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 Y_RNA.666-201ENST00000516187 112 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 AC079600.2-201ENST00000550076 130 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 AL365205.2-201ENST00000594586 68 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 AC090115.4-201ENST00000609970 188 ntBASIC3.44□□□□□ -1.86
EFCC1Q9HA90 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EFCC1Q9HA90 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
EFCC1Q9HA90 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
EFCC1Q9HA90 AP003122.5-201ENST00000527668 3766 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 SNORD61-201ENST00000384252 73 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 SNORA46-201ENST00000384762 135 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 SNORD12C-201ENST00000386307 89 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 SNORD72-201ENST00000390994 80 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 RPL32P35-201ENST00000415214 394 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 CALM2P4-201ENST00000430810 426 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 SNRPGP10-201ENST00000432323 225 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 snoU13.26-201ENST00000459452 105 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 NDUFA4P2-201ENST00000489989 244 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 RNU6-1149P-201ENST00000516810 97 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 MIR3199-1-201ENST00000582434 88 ntBASIC3.43□□□□□ -1.86
EFCC1Q9HA90 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.43□□□□□ -1.86
EFCC1Q9HA90 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
EFCC1Q9HA90 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EFCC1Q9HA90 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
EFCC1Q9HA90 Y_RNA.267-201ENST00000364679 109 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 Y_RNA.366-201ENST00000365540 102 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 RNU6-546P-201ENST00000383991 107 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 RNU6-756P-201ENST00000383997 107 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 AL161788.1-201ENST00000441805 169 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 RPS12P18-201ENST00000442381 270 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
EFCC1Q9HA90 RNU6-693P-201ENST00000516134 107 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.42□□□□□ -1.86
EFCC1Q9HA90 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
EFCC1Q9HA90 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
EFCC1Q9HA90 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
EFCC1Q9HA90 SNORA63.5-201ENST00000363548 123 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 AC003685.2-201ENST00000422795 395 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 RNU6-126P-201ENST00000516685 103 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 SCARNA20.6-201ENST00000517251 106 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 AC107016.2-201ENST00000547968 190 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
EFCC1Q9HA90 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.4□□□□□ -1.86
EFCC1Q9HA90 AC009487.4-201ENST00000624969 3585 ntBASIC3.4□□□□□ -1.86
EFCC1Q9HA90 SNORD73B-201ENST00000364394 72 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 SNORA51.5-201ENST00000384126 131 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 AL513328.1-201ENST00000446460 224 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 RPS29P12-201ENST00000460178 152 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 HMGN1P7-201ENST00000491722 313 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 SCARNA11.3-201ENST00000517276 130 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 AC018630.3-201ENST00000542637 96 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 AL137067.1-201ENST00000615933 120 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 MIR7515-201ENST00000637837 67 ntBASIC3.4□□□□□ -1.87
EFCC1Q9HA90 AC108206.1-201ENST00000570186 4159 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.39□□□□□ -1.87
EFCC1Q9HA90 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
EFCC1Q9HA90 VTRNA1-1-201ENST00000363120 99 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 SNORA51.10-201ENST00000384418 136 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 RNU6-1328P-201ENST00000410938 106 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 RNA5SP492-201ENST00000411330 114 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 HMGN2P35-201ENST00000412164 270 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.39□□□□□ -1.87
EFCC1Q9HA90 AC018634.1-201ENST00000437554 401 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 SEM1P1-201ENST00000506694 209 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 RNA5SP236-201ENST00000516169 116 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 RNU2-34P-201ENST00000516534 121 ntBASIC3.39□□□□□ -1.87
EFCC1Q9HA90 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.39□□□□□ -1.87
EFCC1Q9HA90 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EFCC1Q9HA90 Y_RNA.253-201ENST00000364562 112 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 RNU6-1131P-201ENST00000364955 107 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 RNU6-905P-201ENST00000384434 107 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 MIR520G-201ENST00000385064 90 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 SNORD88.1-201ENST00000408684 91 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 AC060773.1-201ENST00000421698 310 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 RPS15AP28-201ENST00000435088 386 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 RNU6-826P-201ENST00000516827 104 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.38□□□□□ -1.87
EFCC1Q9HA90 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 AC009831.4-201ENST00000620744 325 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 AC080128.1-201ENST00000474389 1917 ntBASIC3.38□□□□□ -1.87
EFCC1Q9HA90 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
EFCC1Q9HA90 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
EFCC1Q9HA90 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
EFCC1Q9HA90 Y_RNA.163-201ENST00000363702 113 ntBASIC3.37□□□□□ -1.87
EFCC1Q9HA90 Y_RNA.281-201ENST00000364774 94 ntBASIC3.37□□□□□ -1.87
EFCC1Q9HA90 RNA5SP467-201ENST00000391274 118 ntBASIC3.37□□□□□ -1.87
EFCC1Q9HA90 MIR1302-5-201ENST00000408164 150 ntBASIC3.37□□□□□ -1.87
EFCC1Q9HA90 AC011406.1-201ENST00000512440 370 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms