Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
UBE2OQ9C0C9 AC079600.2-201ENST00000550076 130 ntBASIC3.36□□□□□ -1.87
UBE2OQ9C0C9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2OQ9C0C9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2OQ9C0C9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 Y_RNA.49-201ENST00000362714 112 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 MIR518F-201ENST00000384973 87 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 AC093259.1-201ENST00000509755 300 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 RNU6-240P-201ENST00000516098 97 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 RNU6-693P-201ENST00000516134 107 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 AC245166.1-201ENST00000521012 253 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 AL589743.1-201ENST00000551932 2712 ntBASIC3.35□□□□□ -1.87
UBE2OQ9C0C9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 SNORD67-201ENST00000390833 111 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 RNU6-440P-201ENST00000390882 105 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 MIR1253-201ENST00000408273 105 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 RNU6-1328P-201ENST00000410938 106 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 AC060773.1-201ENST00000421698 310 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 AC087499.2-201ENST00000432861 149 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 RPS26P48-201ENST00000491713 339 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 MIR5197-201ENST00000583721 112 ntBASIC3.34□□□□□ -1.87
UBE2OQ9C0C9 AC080128.1-201ENST00000474389 1917 ntBASIC3.34□□□□□ -1.88
UBE2OQ9C0C9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBE2OQ9C0C9 Y_RNA.198-201ENST00000364013 98 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 RNU6-546P-201ENST00000383991 107 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 Y_RNA.544-201ENST00000384650 113 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 AC123900.1-201ENST00000420390 96 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 HMGN2P34-201ENST00000437647 269 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 SNRPGP13-201ENST00000442212 177 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 SNORA4.4-201ENST00000515921 135 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE2OQ9C0C9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AL596211.1-201ENST00000569873 2277 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 U8.2-201ENST00000363156 134 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 Y_RNA.362-201ENST00000365518 110 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 RNU6-1113P-201ENST00000384348 107 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 MIR181B1-201ENST00000385240 110 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AL513328.1-201ENST00000446460 224 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AC233266.1-201ENST00000454518 96 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 SNORD109B-201ENST00000458961 67 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 SNORD109A-201ENST00000459128 67 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AC242852.1-201ENST00000612151 96 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 UCA1.1-201ENST00000620952 75 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 AC244015.1-201ENST00000622301 99 ntBASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
UBE2OQ9C0C9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 RNU6-743P-201ENST00000364151 106 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 MIR590-201ENST00000385008 97 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 MICF-203ENST00000432679 129 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 AC244505.4-201ENST00000434905 287 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 SSXP5-201ENST00000443473 287 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 AC006483.1-201ENST00000487308 313 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 RNU7-99P-201ENST00000516271 62 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 RNA5SP24-201ENST00000516478 95 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 RNY4P20-201ENST00000516678 93 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 AC064859.1-201ENST00000624741 174 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 AC110079.1-202ENST00000635213 138 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 AC093831.2-201ENST00000624393 3427 ntBASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE2OQ9C0C9 EDDM3CP-201ENST00000415977 425 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 RNU6-991P-201ENST00000516168 107 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 RNU6-109P-201ENST00000516364 107 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 RNU6-184P-201ENST00000516514 107 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 AC007229.1-201ENST00000590455 412 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 AC018630.2-201ENST00000534866 2403 ntBASIC3.3□□□□□ -1.88
UBE2OQ9C0C9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 MT-TI-201ENST00000387365 69 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 SNORA19.1-201ENST00000410656 129 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 snoU13.15-201ENST00000459407 104 ntBASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.29□□□□□ -1.88
UBE2OQ9C0C9 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 1410.4 ms