Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RNU6-479P-201ENST00000516348 105 ntBASIC3.21□□□□□ -1.9
RETREG2Q8NC44 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RETREG2Q8NC44 AC012640.5-201ENST00000623897 319 ntBASIC3.21□□□□□ -1.9
RETREG2Q8NC44 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RETREG2Q8NC44 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.21□□□□□ -1.9
RETREG2Q8NC44 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 Y_RNA.265-201ENST00000364677 108 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 RNU6-22P-201ENST00000384355 107 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 MIR181B1-201ENST00000385240 110 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 RNU2-7P-201ENST00000410794 178 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 RNA5SP501-201ENST00000410990 112 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 RNA5SP450-201ENST00000411206 102 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 SNORD109B-201ENST00000458961 67 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 SNORD109A-201ENST00000459128 67 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 RNU6-426P-201ENST00000516464 97 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 AC079600.2-201ENST00000550076 130 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 AL049861.1-201ENST00000603130 150 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 MIR6715A-201ENST00000615929 79 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 MIR203B-201ENST00000636080 86 ntBASIC3.2□□□□□ -1.9
RETREG2Q8NC44 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RETREG2Q8NC44 SNORA67.1-201ENST00000364749 141 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RNU6-643P-201ENST00000384018 107 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RN7SKP200-201ENST00000410564 320 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 HMGN2P35-201ENST00000412164 270 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RPL30P13-201ENST00000418873 348 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RPS27P1-201ENST00000450552 247 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 OR9P1P-201ENST00000496431 281 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.19□□□□□ -1.9
RETREG2Q8NC44 SNORD77.4-201ENST00000516158 81 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RNVU1-2-201ENST00000516326 135 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RNA5SP481-201ENST00000516814 122 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 RNU2-19P-201ENST00000517288 84 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.19□□□□□ -1.9
RETREG2Q8NC44 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RETREG2Q8NC44 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 MIR126-201ENST00000362291 85 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 RNA5SP109-201ENST00000391010 116 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 MIR513C-201ENST00000401352 84 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.18□□□□□ -1.9
RETREG2Q8NC44 RNU6-1299P-201ENST00000516316 100 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 AL160236.1-201ENST00000556317 195 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 SUB1P4-201ENST00000566062 339 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 MIR5194-201ENST00000582634 120 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 AL591926.4-201ENST00000616895 298 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 MIR8054-201ENST00000620877 86 ntBASIC3.18□□□□□ -1.9
RETREG2Q8NC44 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.18□□□□□ -1.9
RETREG2Q8NC44 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RETREG2Q8NC44 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RETREG2Q8NC44 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RETREG2Q8NC44 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RETREG2Q8NC44 RNU4-11P-201ENST00000365287 132 ntBASIC3.17□□□□□ -1.9
RETREG2Q8NC44 RNU6-1138P-201ENST00000365359 106 ntBASIC3.17□□□□□ -1.9
RETREG2Q8NC44 RNU2-52P-201ENST00000410680 190 ntBASIC3.17□□□□□ -1.9
RETREG2Q8NC44 MIR3646-201ENST00000578301 84 ntBASIC3.17□□□□□ -1.9
RETREG2Q8NC44 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RETREG2Q8NC44 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.17□□□□□ -1.9
RETREG2Q8NC44 AC010332.2-201ENST00000613083 1904 ntBASIC3.17□□□□□ -1.9
RETREG2Q8NC44 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RETREG2Q8NC44 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RETREG2Q8NC44 SNORD45.3-201ENST00000363836 72 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 MIR512-1-201ENST00000384913 84 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 SNORA40-201ENST00000388090 126 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 RNU6-440P-201ENST00000390882 105 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 RNU6-257P-201ENST00000410238 98 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 RN7SL499P-201ENST00000481141 276 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 RNU6-313P-201ENST00000516317 112 ntBASIC3.16□□□□□ -1.9
RETREG2Q8NC44 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RETREG2Q8NC44 U8.5-201ENST00000364528 136 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 RNU6-818P-201ENST00000364837 108 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 SNORD50B-201ENST00000364995 70 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 AL034345.1-201ENST00000407768 123 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 SNORD23.1-201ENST00000408212 104 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 AC006461.1-201ENST00000412637 326 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.15□□□□□ -1.91
RETREG2Q8NC44 AL606517.2-201ENST00000442855 241 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 AC011753.1-201ENST00000451001 220 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 RNA5SP153-201ENST00000516498 76 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 MIR4762-201ENST00000585261 75 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RETREG2Q8NC44 AC008555.8-201ENST00000623602 2168 ntBASIC3.15□□□□□ -1.91
RETREG2Q8NC44 RNU6-199P-201ENST00000362954 107 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 MIR802-201ENST00000390235 94 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 RNU6-1168P-201ENST00000390831 104 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 Y_RNA.622-201ENST00000411091 108 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RETREG2Q8NC44 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.14□□□□□ -1.91
RETREG2Q8NC44 FTH1P12-201ENST00000432137 551 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 SNORA9.3-201ENST00000516383 129 ntBASIC3.14□□□□□ -1.91
RETREG2Q8NC44 RNU7-149P-201ENST00000516739 59 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms