Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 AC062016.1-201ENST00000355719 319 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 MIR126-201ENST00000362291 85 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 MIR802-201ENST00000390235 94 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 MIR1183-201ENST00000408856 89 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 RNA5SP144-201ENST00000410846 116 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 RN7SKP132-201ENST00000516001 208 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 SNORA18.7-201ENST00000516910 131 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 AC006441.5-201ENST00000612680 209 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 U7.4-201ENST00000614961 63 ntBASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
RSPO4Q2I0M5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RSPO4Q2I0M5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RSPO4Q2I0M5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
RSPO4Q2I0M5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
RSPO4Q2I0M5 RNU6-283P-201ENST00000364788 107 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 Y_RNA.547-201ENST00000384654 119 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 RNA5SP247-201ENST00000411181 105 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AL512326.2-201ENST00000426359 151 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AC105272.1-201ENST00000438604 198 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AL109933.2-201ENST00000452651 260 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 snoU13.28-201ENST00000459235 104 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AC004223.1-201ENST00000479840 271 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 RPL36AP48-201ENST00000485521 314 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 RNU1-61P-201ENST00000516107 151 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 RNU2-34P-201ENST00000516534 121 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AC078899.2-201ENST00000595282 212 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 AC096720.1-201ENST00000604441 183 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RSPO4Q2I0M5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AC002546.1-201ENST00000588041 2504 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 Y_RNA.299-201ENST00000364973 94 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 RN7SKP200-201ENST00000410564 320 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AL022718.1-201ENST00000412004 84 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AL445646.1-201ENST00000431784 216 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 FTH1P12-201ENST00000432137 551 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AL135938.1-201ENST00000443141 297 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 RNU6-1291P-201ENST00000516591 104 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 MIR3609-201ENST00000582661 80 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AC002984.1-201ENST00000591692 448 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 AC090517.3-201ENST00000625170 141 ntBASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RSPO4Q2I0M5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 Y_RNA.609-201ENST00000410669 89 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 HMGN2P16-201ENST00000456802 261 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 MIR2114-201ENST00000516645 80 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 AP003484.1-201ENST00000530974 250 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 AC090115.4-201ENST00000609970 188 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 AC012531.5-201ENST00000611375 151 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 uc_338.32-201ENST00000615087 172 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RSPO4Q2I0M5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 RNA5SP42-201ENST00000364278 115 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 RNU6-438P-201ENST00000365561 103 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 RNU6-524P-201ENST00000384270 107 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 MIR522-201ENST00000385071 87 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 RPL30P14-201ENST00000482744 348 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 AC008413.1-201ENST00000511864 177 ntBASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RSPO4Q2I0M5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 RNU6-457P-201ENST00000363999 107 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 RNU6-442P-201ENST00000383968 104 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 AC090255.1-201ENST00000495779 349 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 AC103810.7-201ENST00000607821 91 ntBASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO4Q2I0M5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 275.8 ms