Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 MIR5680-201ENST00000577577 84 ntBASIC3.5□□□□□ -1.85
FOXC1Q12948 AC020891.4-201ENST00000605745 93 ntBASIC3.5□□□□□ -1.85
FOXC1Q12948 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXC1Q12948 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXC1Q12948 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
FOXC1Q12948 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXC1Q12948 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
FOXC1Q12948 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXC1Q12948 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
FOXC1Q12948 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXC1Q12948 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
FOXC1Q12948 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXC1Q12948 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.49□□□□□ -1.85
FOXC1Q12948 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SNORA8-201ENST00000384574 139 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 AC069285.2-201ENST00000440210 275 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 RNU7-34P-201ENST00000459394 64 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 AL163195.1-201ENST00000496941 348 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 AC025554.1-201ENST00000505641 188 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SCARNA17.1-201ENST00000516211 143 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SCARNA17.2-201ENST00000516334 143 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SNORA25.13-201ENST00000516395 103 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 IGLV3-17-201ENST00000519099 244 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 AC024995.1-201ENST00000523014 93 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXC1Q12948 AL513043.2-201ENST00000573941 143 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 MIR3134-201ENST00000579433 74 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 MIR3152-201ENST00000579801 74 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SNORA62.6-201ENST00000606322 83 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 SCARNA17.4-201ENST00000614296 143 ntBASIC3.49□□□□□ -1.85
FOXC1Q12948 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
FOXC1Q12948 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXC1Q12948 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
FOXC1Q12948 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXC1Q12948 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 SNORA32-201ENST00000384072 121 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 MIR34C-201ENST00000384831 77 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 MIR708-201ENST00000390708 88 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 HSPE1P26-201ENST00000405341 275 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXC1Q12948 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXC1Q12948 RNU7-153P-201ENST00000516455 62 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 AC006023.1-201ENST00000603944 259 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 MIR7106-201ENST00000612419 65 ntBASIC3.48□□□□□ -1.85
FOXC1Q12948 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
FOXC1Q12948 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
FOXC1Q12948 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.48□□□□□ -1.85
FOXC1Q12948 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.48□□□□□ -1.85
FOXC1Q12948 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXC1Q12948 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.47□□□□□ -1.85
FOXC1Q12948 SNORA25.6-201ENST00000364121 118 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 Y_RNA.386-201ENST00000383913 105 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 MIR95-201ENST00000385072 81 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 MIR548G-201ENST00000408442 89 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 RNU1-98P-201ENST00000458992 160 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 S100A11P2-201ENST00000467589 312 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 UBL5P3-201ENST00000475112 231 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 VWA8P1-201ENST00000510889 176 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
FOXC1Q12948 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXC1Q12948 MFSD8-233ENST00000641482 4860 ntBASIC3.47□□□□□ -1.85
FOXC1Q12948 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXC1Q12948 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
FOXC1Q12948 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
FOXC1Q12948 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.46□□□□□ -1.85
FOXC1Q12948 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXC1Q12948 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
FOXC1Q12948 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
FOXC1Q12948 MIR206-201ENST00000384872 86 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 MIR515-2-201ENST00000384883 83 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 MIR515-1-201ENST00000384884 83 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 SNORD96B-201ENST00000386148 79 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 SNORA71B-202ENST00000439232 272 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 AL450471.1-201ENST00000447509 127 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 SCARNA18B-201ENST00000458806 135 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 RNU2-58P-201ENST00000516403 183 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 RNU7-28P-201ENST00000516759 62 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.46□□□□□ -1.86
FOXC1Q12948 AP000553.6-201ENST00000641242 118 ntBASIC3.46□□□□□ -1.86
FOXC1Q12948 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXC1Q12948 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
FOXC1Q12948 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.45□□□□□ -1.86
FOXC1Q12948 ICE2P2-201ENST00000483823 2787 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 MIR448-201ENST00000362131 111 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 Y_RNA.173-201ENST00000363776 113 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 RNA5SP323-201ENST00000391094 133 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 MIR1267-201ENST00000408723 78 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 SRIP3-201ENST00000413200 219 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
FOXC1Q12948 MICF-203ENST00000432679 129 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 RNU6-826P-201ENST00000516827 104 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 RNU6-557P-201ENST00000516842 110 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 RNU7-181P-201ENST00000517234 74 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 AC008011.1-201ENST00000545989 227 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 U4.6-201ENST00000621618 127 ntBASIC3.45□□□□□ -1.86
FOXC1Q12948 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms