Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU2-56P-201ENST00000516826 190 ntBASIC2.6□□□□□ -1.99
SSRP1Q08945 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SSRP1Q08945 Y_RNA.75-201ENST00000362927 97 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 PCNPP3-201ENST00000393579 471 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 MIR1278-201ENST00000408753 81 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 RNU4-53P-201ENST00000410828 140 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 AC078899.2-201ENST00000595282 212 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 AL021707.8-201ENST00000609428 183 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 JPX_2.1-201ENST00000614161 69 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
SSRP1Q08945 MIRLET7G-201ENST00000362280 84 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RNA5SP432-201ENST00000362480 116 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RNU6-1209P-201ENST00000363655 107 ntBASIC2.58□□□□□ -2
SSRP1Q08945 Y_RNA.796-201ENST00000364268 102 ntBASIC2.58□□□□□ -2
SSRP1Q08945 Y_RNA.799-201ENST00000364992 102 ntBASIC2.58□□□□□ -2
SSRP1Q08945 Y_RNA.412-201ENST00000384001 104 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RNY3P5-201ENST00000384127 102 ntBASIC2.58□□□□□ -2
SSRP1Q08945 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.58□□□□□ -2
SSRP1Q08945 RNU6-578P-201ENST00000390980 103 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RNU6-1228P-201ENST00000391014 107 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RN7SKP51-201ENST00000410781 304 ntBASIC2.58□□□□□ -2
SSRP1Q08945 AL049830.1-201ENST00000468034 425 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RNU2-19P-201ENST00000517288 84 ntBASIC2.58□□□□□ -2
SSRP1Q08945 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.58□□□□□ -2
SSRP1Q08945 MRPS18CP4-201ENST00000535821 231 ntBASIC2.58□□□□□ -2
SSRP1Q08945 SUB1P4-201ENST00000566062 339 ntBASIC2.58□□□□□ -2
SSRP1Q08945 RPL23AP91-201ENST00000569211 455 ntBASIC2.58□□□□□ -2
SSRP1Q08945 AC009831.4-201ENST00000620744 325 ntBASIC2.58□□□□□ -2
SSRP1Q08945 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SSRP1Q08945 SNORA63D-201ENST00000364359 132 ntBASIC2.57□□□□□ -2
SSRP1Q08945 Y_RNA.253-201ENST00000364562 112 ntBASIC2.57□□□□□ -2
SSRP1Q08945 RNU6-275P-201ENST00000364910 107 ntBASIC2.57□□□□□ -2
SSRP1Q08945 SNORD23.1-201ENST00000408212 104 ntBASIC2.57□□□□□ -2
SSRP1Q08945 AC023449.1-201ENST00000454464 154 ntBASIC2.57□□□□□ -2
SSRP1Q08945 HMGN1P7-201ENST00000491722 313 ntBASIC2.57□□□□□ -2
SSRP1Q08945 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.57□□□□□ -2
SSRP1Q08945 AC108706.1-201ENST00000611053 297 ntBASIC2.57□□□□□ -2
SSRP1Q08945 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.57□□□□□ -2
SSRP1Q08945 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.57□□□□□ -2
SSRP1Q08945 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SSRP1Q08945 MT-TT-201ENST00000387460 66 ntBASIC2.56□□□□□ -2
SSRP1Q08945 AL606845.1-201ENST00000404881 255 ntBASIC2.56□□□□□ -2
SSRP1Q08945 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.56□□□□□ -2
SSRP1Q08945 AC055731.1-201ENST00000474387 401 ntBASIC2.56□□□□□ -2
SSRP1Q08945 AC074198.2-201ENST00000508153 258 ntBASIC2.56□□□□□ -2
SSRP1Q08945 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.56□□□□□ -2
SSRP1Q08945 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.56□□□□□ -2
SSRP1Q08945 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.55□□□□□ -2
SSRP1Q08945 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSRP1Q08945 Y_RNA.23-201ENST00000362496 106 ntBASIC2.55□□□□□ -2
SSRP1Q08945 RNU6-312P-201ENST00000364629 107 ntBASIC2.55□□□□□ -2
SSRP1Q08945 SNORA70B-201ENST00000384210 135 ntBASIC2.55□□□□□ -2
SSRP1Q08945 MIR520A-201ENST00000384862 85 ntBASIC2.55□□□□□ -2
SSRP1Q08945 SNORD11-201ENST00000459124 84 ntBASIC2.55□□□□□ -2
SSRP1Q08945 RNU1-41P-201ENST00000516161 162 ntBASIC2.55□□□□□ -2
SSRP1Q08945 RNA5SP200-201ENST00000516360 103 ntBASIC2.55□□□□□ -2
SSRP1Q08945 RNU1-48P-201ENST00000516400 162 ntBASIC2.55□□□□□ -2
SSRP1Q08945 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.55□□□□□ -2
SSRP1Q08945 AC109810.1-201ENST00000534066 224 ntBASIC2.55□□□□□ -2
SSRP1Q08945 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
SSRP1Q08945 MIR8054-201ENST00000620877 86 ntBASIC2.55□□□□□ -2
SSRP1Q08945 AC012640.5-201ENST00000623897 319 ntBASIC2.55□□□□□ -2
SSRP1Q08945 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.55□□□□□ -2
SSRP1Q08945 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSRP1Q08945 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.55□□□□□ -2
SSRP1Q08945 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SSRP1Q08945 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SSRP1Q08945 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.54□□□□□ -2
SSRP1Q08945 RNU6-112P-201ENST00000363599 104 ntBASIC2.54□□□□□ -2
SSRP1Q08945 Y_RNA.587-201ENST00000391210 103 ntBASIC2.54□□□□□ -2
SSRP1Q08945 SNRPGP10-201ENST00000432323 225 ntBASIC2.54□□□□□ -2
SSRP1Q08945 AC104435.1-201ENST00000483483 166 ntBASIC2.54□□□□□ -2
SSRP1Q08945 RNU7-28P-201ENST00000516759 62 ntBASIC2.54□□□□□ -2
SSRP1Q08945 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.54□□□□□ -2
SSRP1Q08945 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.54□□□□□ -2
SSRP1Q08945 AL049861.1-201ENST00000603130 150 ntBASIC2.54□□□□□ -2
SSRP1Q08945 uc_338.4-201ENST00000616635 176 ntBASIC2.54□□□□□ -2
SSRP1Q08945 AL591926.4-201ENST00000616895 298 ntBASIC2.54□□□□□ -2
SSRP1Q08945 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
SSRP1Q08945 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SSRP1Q08945 RNU6-728P-201ENST00000365375 104 ntBASIC2.53□□□□□ -2
SSRP1Q08945 Y_RNA.464-201ENST00000384282 110 ntBASIC2.53□□□□□ -2
SSRP1Q08945 RNU6-950P-201ENST00000384651 107 ntBASIC2.53□□□□□ -2
SSRP1Q08945 RNU6-440P-201ENST00000390882 105 ntBASIC2.53□□□□□ -2
SSRP1Q08945 RNA5SP482-201ENST00000391269 118 ntBASIC2.53□□□□□ -2
SSRP1Q08945 RNU2-7P-201ENST00000410794 178 ntBASIC2.53□□□□□ -2
SSRP1Q08945 AC064859.1-201ENST00000624741 174 ntBASIC2.53□□□□□ -2
SSRP1Q08945 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.53□□□□□ -2
SSRP1Q08945 AC005336.3-201ENST00000623833 2679 ntBASIC2.53□□□□□ -2.01
SSRP1Q08945 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
SSRP1Q08945 ZNF720P1-201ENST00000562403 1939 ntBASIC2.52□□□□□ -2.01
SSRP1Q08945 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSRP1Q08945 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SSRP1Q08945 MIR126-201ENST00000362291 85 ntBASIC2.52□□□□□ -2.01
SSRP1Q08945 Y_RNA.265-201ENST00000364677 108 ntBASIC2.52□□□□□ -2.01
SSRP1Q08945 RNU6-296P-201ENST00000384608 107 ntBASIC2.52□□□□□ -2.01
SSRP1Q08945 SNORA48.3-201ENST00000391081 134 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms