Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.34□□□□□ -2.03
CACNA2D1P54289 MIR1273D-201ENST00000577266 86 ntBASIC2.34□□□□□ -2.03
CACNA2D1P54289 MIR5739-201ENST00000619803 80 ntBASIC2.34□□□□□ -2.03
CACNA2D1P54289 MIR6844-201ENST00000637122 62 ntBASIC2.34□□□□□ -2.03
CACNA2D1P54289 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CACNA2D1P54289 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CACNA2D1P54289 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CACNA2D1P54289 RNU4-13P-201ENST00000364019 141 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 RNU4-41P-201ENST00000364426 143 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 SNORA67.3-201ENST00000384366 140 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 MIR1261-201ENST00000408659 82 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 AC008134.1-201ENST00000420943 193 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA2D1P54289 AC092991.1-201ENST00000477176 376 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 RNU6-991P-201ENST00000516168 107 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CACNA2D1P54289 AL929325.1-201ENST00000603096 117 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.33□□□□□ -2.04
CACNA2D1P54289 AP000553.5-201ENST00000641933 54 ntBASIC2.33□□□□□ -2.04
CACNA2D1P54289 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.32□□□□□ -2.04
CACNA2D1P54289 CENPCP1-201ENST00000533085 2578 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 Y_RNA.71-201ENST00000362892 104 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 SNORD50B-201ENST00000364995 70 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 Y_RNA.393-201ENST00000383936 102 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 RNY3P5-201ENST00000384127 102 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AL512604.1-201ENST00000404812 257 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AC003685.2-201ENST00000422795 395 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AC008267.6-201ENST00000441664 139 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AL161788.1-201ENST00000441805 169 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 MTCO1P44-201ENST00000441935 243 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 RPS27P1-201ENST00000450552 247 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.32□□□□□ -2.04
CACNA2D1P54289 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 MIR5694-201ENST00000581190 76 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AL049861.1-201ENST00000603130 150 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AL355297.2-201ENST00000604792 129 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 AC006435.5-201ENST00000624486 112 ntBASIC2.32□□□□□ -2.04
CACNA2D1P54289 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.32□□□□□ -2.04
CACNA2D1P54289 RNU1-22P-201ENST00000363334 158 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 RNU6-674P-201ENST00000363831 107 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 RNU6-1082P-201ENST00000364574 107 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 RNU6-1336P-201ENST00000383886 109 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 RNU4-43P-201ENST00000410628 137 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 RN7SKP101-201ENST00000411376 320 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CACNA2D1P54289 CYP2C59P-201ENST00000457790 269 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 RNU6-1333P-201ENST00000516162 93 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 MIR4648-201ENST00000580107 72 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 MIR4438-201ENST00000585271 93 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 MIR6873-201ENST00000622788 63 ntBASIC2.31□□□□□ -2.04
CACNA2D1P54289 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CACNA2D1P54289 AC009487.4-201ENST00000624969 3585 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA2D1P54289 MIR340-201ENST00000362125 95 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 SNORA72-201ENST00000384339 132 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 MIR95-201ENST00000385072 81 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 RNU2-48P-201ENST00000410694 191 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 RPS4XP11-201ENST00000446897 772 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 AC093259.1-201ENST00000509755 300 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 AC097462.1-201ENST00000514125 324 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 RNU2-34P-201ENST00000516534 121 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 RNU7-172P-201ENST00000517125 64 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 MIR3646-201ENST00000578301 84 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 AC120024.3-201ENST00000603167 156 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 AL021707.8-201ENST00000609428 183 ntBASIC2.3□□□□□ -2.04
CACNA2D1P54289 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.3□□□□□ -2.04
CACNA2D1P54289 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CACNA2D1P54289 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
CACNA2D1P54289 Y_RNA.127-201ENST00000363386 109 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 RNA5SP205-201ENST00000364653 136 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 RNA5SP496-201ENST00000391240 109 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 AC123900.1-201ENST00000420390 96 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 RNU2-56P-201ENST00000516826 190 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 RPL23AP91-201ENST00000569211 455 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 MIR378D2-201ENST00000580636 98 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 AC011603.4-201ENST00000611325 277 ntBASIC2.29□□□□□ -2.04
CACNA2D1P54289 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.28□□□□□ -2.04
CACNA2D1P54289 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CACNA2D1P54289 Y_RNA.81-201ENST00000362997 102 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 Y_RNA.251-201ENST00000364551 99 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 Y_RNA.332-201ENST00000365271 113 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 MIR539-201ENST00000365690 78 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 SNORD116-14-201ENST00000383894 92 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 SNORD116-17-201ENST00000383929 92 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 RNU4-52P-201ENST00000384209 138 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 SNORD116-15-201ENST00000384445 92 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 SNORD20-201ENST00000384550 80 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 SNORD116-19-201ENST00000384729 92 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 RN7SKP192-201ENST00000411291 327 ntBASIC2.28□□□□□ -2.04
CACNA2D1P54289 AC060773.1-201ENST00000421698 310 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms