Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RPS29P4-201ENST00000414733 161 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 AC093850.1-201ENST00000454121 251 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 snoU13.11-201ENST00000459219 104 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 RPS29P12-201ENST00000460178 152 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 RNU7-137P-201ENST00000516788 62 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC4.19□□□□□ -1.74
NUBP1P53384 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.19□□□□□ -1.74
NUBP1P53384 MIR7151-201ENST00000617477 60 ntBASIC4.19□□□□□ -1.74
NUBP1P53384 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.19□□□□□ -1.74
NUBP1P53384 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NUBP1P53384 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
NUBP1P53384 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUBP1P53384 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUBP1P53384 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NUBP1P53384 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.18□□□□□ -1.74
NUBP1P53384 Y_RNA.500-201ENST00000384466 111 ntBASIC4.18□□□□□ -1.74
NUBP1P53384 SNORA2B-201ENST00000384583 137 ntBASIC4.18□□□□□ -1.74
NUBP1P53384 RN7SL293P-201ENST00000481765 281 ntBASIC4.18□□□□□ -1.74
NUBP1P53384 AC091178.1-203ENST00000584586 279 ntBASIC4.18□□□□□ -1.74
NUBP1P53384 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.18□□□□□ -1.74
NUBP1P53384 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUBP1P53384 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NUBP1P53384 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NUBP1P53384 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 RNU4-32P-201ENST00000363404 141 ntBASIC4.17□□□□□ -1.74
NUBP1P53384 SNORA3.3-201ENST00000408712 125 ntBASIC4.17□□□□□ -1.74
NUBP1P53384 AL450471.1-201ENST00000447509 127 ntBASIC4.17□□□□□ -1.74
NUBP1P53384 RN7SL594P-201ENST00000470590 287 ntBASIC4.17□□□□□ -1.74
NUBP1P53384 RNU6-523P-201ENST00000516304 54 ntBASIC4.17□□□□□ -1.74
NUBP1P53384 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NUBP1P53384 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NUBP1P53384 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUBP1P53384 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
NUBP1P53384 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NUBP1P53384 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUBP1P53384 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC4.16□□□□□ -1.74
NUBP1P53384 SNORD6-201ENST00000365444 73 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 RNU1-109P-201ENST00000383960 147 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 RNU6-411P-201ENST00000384451 107 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 MIR30B-201ENST00000384850 88 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 RN7SL323P-201ENST00000494712 295 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 RNU6-557P-201ENST00000516842 110 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 CYCSP40-201ENST00000575927 294 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 MIR8065-201ENST00000620577 100 ntBASIC4.16□□□□□ -1.74
NUBP1P53384 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUBP1P53384 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC4.16□□□□□ -1.74
NUBP1P53384 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NUBP1P53384 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
NUBP1P53384 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
NUBP1P53384 RNU6-1031P-201ENST00000384773 107 ntBASIC4.15□□□□□ -1.75
NUBP1P53384 AC087499.7-201ENST00000441958 109 ntBASIC4.15□□□□□ -1.75
NUBP1P53384 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.15□□□□□ -1.75
NUBP1P53384 AC020891.4-201ENST00000605745 93 ntBASIC4.15□□□□□ -1.75
NUBP1P53384 MIR8066-201ENST00000617280 78 ntBASIC4.15□□□□□ -1.75
NUBP1P53384 AC022513.1-201ENST00000624512 117 ntBASIC4.15□□□□□ -1.75
NUBP1P53384 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUBP1P53384 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NUBP1P53384 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NUBP1P53384 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUBP1P53384 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUBP1P53384 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUBP1P53384 SNORD115-3-201ENST00000363100 82 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 RNU6-686P-201ENST00000364839 107 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 RNVU1-14-201ENST00000384770 164 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 MIR29C-201ENST00000385231 88 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 MIR591-201ENST00000385290 95 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 MIR1179-201ENST00000408703 91 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC4.14□□□□□ -1.75
NUBP1P53384 RPS26P28-201ENST00000470806 348 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 MIR8069-1-201ENST00000616627 86 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 AL449363.1-201ENST00000617815 186 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 MIR8069-2-201ENST00000621412 86 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 AC091905.2-201ENST00000623143 306 ntBASIC4.14□□□□□ -1.75
NUBP1P53384 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUBP1P53384 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NUBP1P53384 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUBP1P53384 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.14□□□□□ -1.75
NUBP1P53384 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NUBP1P53384 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 RNU1-58P-201ENST00000362413 163 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 SNORD4B-201ENST00000459083 72 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 AC006064.5-201ENST00000541782 248 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 AC015912.2-201ENST00000571053 181 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 MIR5094-201ENST00000578766 85 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 MIR4644-201ENST00000579929 84 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 Z97988.1-201ENST00000637697 135 ntBASIC4.13□□□□□ -1.75
NUBP1P53384 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUBP1P53384 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms