Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 SNORA36B-201ENST00000410438 131 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMAD6O43541 AC074290.1-201ENST00000448883 135 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 HSPE1P13-201ENST00000451143 297 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 RPS26P55-201ENST00000471178 356 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 UBL5P3-201ENST00000475112 231 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.09□□□□□ -2.07
SMAD6O43541 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.09□□□□□ -2.07
SMAD6O43541 AC010598.1-201ENST00000510378 103 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 RNU6-586P-201ENST00000517265 104 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.09□□□□□ -2.07
SMAD6O43541 MIR5688-201ENST00000580619 83 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 AL627230.6-201ENST00000611129 280 ntBASIC2.09□□□□□ -2.07
SMAD6O43541 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.09□□□□□ -2.07
SMAD6O43541 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
SMAD6O43541 AC008555.8-201ENST00000623602 2168 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 Y_RNA.337-201ENST00000365312 102 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 SNORA20-201ENST00000384662 132 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 AL512604.1-201ENST00000404812 257 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 AC009238.1-201ENST00000442165 424 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.08□□□□□ -2.08
SMAD6O43541 AC009237.6-201ENST00000446969 424 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 AC090515.1-201ENST00000465295 476 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 RNU6-313P-201ENST00000516317 112 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 RNU6-63P-201ENST00000516690 95 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 RNU6-965P-201ENST00000516721 96 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 AP003357.1-201ENST00000604497 148 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.08□□□□□ -2.08
SMAD6O43541 AL159152.1-201ENST00000635019 2587 ntBASIC2.08□□□□□ -2.08
SMAD6O43541 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SMAD6O43541 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-271P-201ENST00000363858 105 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-643P-201ENST00000384018 107 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-418P-201ENST00000384035 107 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-376P-201ENST00000384731 106 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 SNORA40-201ENST00000388090 126 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MIR676-201ENST00000390702 67 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-1168P-201ENST00000390831 104 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-1228P-201ENST00000391014 107 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MIR513C-201ENST00000401352 84 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MIR1289-2-201ENST00000408360 111 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNU6-735P-201ENST00000410612 107 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RPL30P13-201ENST00000418873 348 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MTND4LP9-201ENST00000427694 174 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.07□□□□□ -2.08
SMAD6O43541 CYP2C59P-201ENST00000457790 269 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AC016925.1-201ENST00000458303 298 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 RNA5SP20-201ENST00000515976 84 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AC025647.1-201ENST00000517879 253 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AC018630.3-201ENST00000542637 96 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AC127455.1-201ENST00000565496 145 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 POLR3GP1-201ENST00000594073 261 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AL096840.1-201ENST00000603287 93 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 AL355297.2-201ENST00000604792 129 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MIR5739-201ENST00000619803 80 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 MIR1248-201ENST00000629190 106 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 CENPCP1-201ENST00000533085 2578 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 ZNF702P-202ENST00000434269 1966 ntBASIC2.07□□□□□ -2.08
SMAD6O43541 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SMAD6O43541 RNU6-199P-201ENST00000362954 107 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 AC016909.1-201ENST00000415916 166 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
SMAD6O43541 HMGN2P3-201ENST00000433603 273 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 HMGN2P5-201ENST00000436882 273 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
SMAD6O43541 RPL23AP54-201ENST00000495129 419 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 MRPS17P9-201ENST00000511924 393 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 RNU6-971P-201ENST00000516920 106 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 AC112693.2-201ENST00000556538 232 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 SNRPGP19-201ENST00000603826 189 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.06□□□□□ -2.08
SMAD6O43541 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SMAD6O43541 RNU6-728P-201ENST00000365375 104 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 Y_RNA.420-201ENST00000384043 110 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 SNORD37.2-201ENST00000391075 66 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 MIR1278-201ENST00000408753 81 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 RNU2-40P-201ENST00000410833 196 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 HMGN2P18-201ENST00000450680 270 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 RPL36AP21-201ENST00000490372 323 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 RNU6-948P-201ENST00000516374 107 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 MIR5089-201ENST00000580047 84 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 AC005972.2-201ENST00000604690 348 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
SMAD6O43541 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SMAD6O43541 Y_RNA.261-201ENST00000364631 102 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 SNORD50B-201ENST00000364995 70 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNU6-438P-201ENST00000365561 103 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNU6-1235P-201ENST00000384559 107 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 Y_RNA.542-201ENST00000384641 111 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNU6-768P-201ENST00000384683 107 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNA5SP511-201ENST00000410487 115 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 Y_RNA.622-201ENST00000411091 108 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.04□□□□□ -2.08
SMAD6O43541 RNU7-197P-201ENST00000458836 62 ntBASIC2.04□□□□□ -2.08
SMAD6O43541 RNU6-437P-201ENST00000459408 95 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms