Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 AC004486.1-201ENST00000546846 233 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 AC022217.4-201ENST00000604389 163 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 AC006441.5-201ENST00000612680 209 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 SNORA5A-201ENST00000384111 134 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 MIR548O-201ENST00000408583 114 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 AC104332.2-201ENST00000429959 156 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 RNU1-95P-201ENST00000516357 160 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 RNU1-128P-201ENST00000516704 160 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 IGKV2-26-201ENST00000518305 343 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 MIR6733-201ENST00000635723 61 ntBASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM33Q9UPN9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 SNORA1B-201ENST00000362535 133 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 SNORA2.2-201ENST00000365473 135 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 Y_RNA.362-201ENST00000365518 110 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 RNU6-1189P-201ENST00000383958 107 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 MIR515-2-201ENST00000384883 83 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 MIR515-1-201ENST00000384884 83 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 MIR561-201ENST00000385216 97 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 MIR802-201ENST00000390235 94 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 SNORD17-201ENST00000390930 237 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 AC099677.2-201ENST00000436385 175 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 AL049830.1-201ENST00000468034 425 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 MIR4762-201ENST00000585261 75 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 AC012442.3-202ENST00000636742 206 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 ZNF720P1-201ENST00000562403 1939 ntBASIC3.11□□□□□ -1.91
TRIM33Q9UPN9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 RNU6-690P-201ENST00000365242 106 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 RNU6-442P-201ENST00000383968 104 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 SNORA51.10-201ENST00000384418 136 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 Y_RNA.558-201ENST00000384685 113 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 MIR592-201ENST00000384959 97 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 RNY4P20-201ENST00000516678 93 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 AC024995.1-201ENST00000523014 93 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 IGKV3-31-201ENST00000523109 329 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 AL355297.2-201ENST00000604792 129 ntBASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM33Q9UPN9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNU6-349P-201ENST00000362402 107 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 U8.5-201ENST00000364528 136 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNU6-1131P-201ENST00000364955 107 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 MIR759-201ENST00000390224 91 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 SRIP3-201ENST00000413200 219 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNU1-131P-201ENST00000458943 161 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RN7SL636P-201ENST00000497504 294 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 RNU6-667P-201ENST00000517186 102 ntBASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM33Q9UPN9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM33Q9UPN9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 RNU4-35P-201ENST00000362588 141 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 SNORD14E-201ENST00000364009 85 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 RNA5SP323-201ENST00000391094 133 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 RPS29P4-201ENST00000414733 161 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 AC018868.1-201ENST00000491307 315 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 RNU6-970P-201ENST00000516312 107 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 MIR5009-201ENST00000578736 100 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 AC009093.8-201ENST00000641769 292 ntBASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM33Q9UPN9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 Y_RNA.37-201ENST00000362606 108 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 RNU6-414P-201ENST00000363705 104 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 SNORD115-28-201ENST00000363931 81 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 RNU6-49P-201ENST00000384256 107 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 SNORA8-201ENST00000384574 139 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 RNU6-440P-201ENST00000390882 105 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 SNRPGP14-201ENST00000435400 219 ntBASIC3.07□□□□□ -1.92
TRIM33Q9UPN9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms