Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 RNU7-128P-201ENST00000517247 62 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 AC008507.4-201ENST00000585464 127 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 AC022217.4-201ENST00000604389 163 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 ZNF271P-202ENST00000465539 1970 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 MIR422A-201ENST00000362286 90 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNU6-888P-201ENST00000363010 101 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNU6-147P-201ENST00000383983 107 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 MIR548A1-201ENST00000385041 97 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 SNORD72-201ENST00000390994 80 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNU6-693P-201ENST00000516134 107 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNU6-1270P-201ENST00000517128 108 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 RNA5SP170-201ENST00000517150 101 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 AL353149.1-201ENST00000610667 244 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SALL4Q9UJQ4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 AL035425.3-201ENST00000564206 4996 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.43-201ENST00000362670 111 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.99-201ENST00000363138 105 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 RNU6-880P-201ENST00000384526 107 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 MIR515-2-201ENST00000384883 83 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 MIR515-1-201ENST00000384884 83 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 MIRLET7F2-201ENST00000385277 83 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 MIR802-201ENST00000390235 94 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 SNORA11.2-201ENST00000408318 127 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 RN7SKP123-201ENST00000410732 291 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 RNU1-131P-201ENST00000458943 161 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.651-201ENST00000459380 103 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 RNU7-94P-201ENST00000459576 63 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 RN7SL636P-201ENST00000497504 294 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.666-201ENST00000516187 112 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 AL449363.1-201ENST00000617815 186 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SALL4Q9UJQ4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 MTND5P18-201ENST00000445624 1801 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 RNU6-1298P-201ENST00000362456 101 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 RNU6-220P-201ENST00000390919 107 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 MIR1263-201ENST00000408324 86 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 ATP5J2P3-201ENST00000451550 258 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 AL049830.1-201ENST00000468034 425 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 RNU6-113P-201ENST00000516653 101 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SALL4Q9UJQ4 AC245060.5-201ENST00000610778 3293 ntBASIC3.15□□□□□ -1.9
SALL4Q9UJQ4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SALL4Q9UJQ4 RNU6-1164P-201ENST00000364428 107 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 SNORA25B-201ENST00000365507 128 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 SNORA8-201ENST00000384574 139 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AC007064.1-201ENST00000412238 351 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 SNRPGP13-201ENST00000442212 177 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AC018868.1-201ENST00000491307 315 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 SCGB1D5P-201ENST00000515134 247 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AP002004.2-201ENST00000531656 154 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 EIF4BP1-201ENST00000554881 351 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 MIR4506-201ENST00000584693 77 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AL591926.4-201ENST00000616895 298 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 AC008555.8-201ENST00000623602 2168 ntBASIC3.15□□□□□ -1.91
SALL4Q9UJQ4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 RNU6-160P-201ENST00000384591 107 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 MIR1289-1-201ENST00000408836 144 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 COTL1P1-201ENST00000422309 375 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 FTH1P12-201ENST00000432137 551 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 RNA5SP236-201ENST00000516169 116 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AC024995.1-201ENST00000523014 93 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 U6.108-201ENST00000637764 58 ntBASIC3.14□□□□□ -1.91
SALL4Q9UJQ4 MIR22-201ENST00000362190 85 ntBASIC3.13□□□□□ -1.91
SALL4Q9UJQ4 Y_RNA.309-201ENST00000365046 111 ntBASIC3.13□□□□□ -1.91
SALL4Q9UJQ4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms