Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RNU7-193P-201ENST00000516723 65 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 MIR4529-201ENST00000578110 78 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 MIR378D2-201ENST00000580636 98 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 AC008507.4-201ENST00000585464 127 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 MIR8054-201ENST00000620877 86 ntBASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VTI1BQ9UEU0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 U8.5-201ENST00000364528 136 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 RNU4-11P-201ENST00000365287 132 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SNORA54-201ENST00000384281 123 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.488-201ENST00000384403 102 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 RNU6-768P-201ENST00000384683 107 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR512-1-201ENST00000384913 84 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MLLT10P1-201ENST00000418346 262 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 FTH1P12-201ENST00000432137 551 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MRPS17P9-201ENST00000511924 393 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 AC107016.2-201ENST00000547968 190 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 AC091544.4-201ENST00000555268 342 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SUB1P4-201ENST00000566062 339 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR3646-201ENST00000578301 84 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR3910-1-201ENST00000580936 111 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR4325-201ENST00000583049 90 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR4762-201ENST00000585261 75 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.85□□□□□ -1.95
VTI1BQ9UEU0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 ZNF702P-202ENST00000434269 1966 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.91-201ENST00000363042 107 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 SNORD68-201ENST00000363214 84 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 RNU6-704P-201ENST00000364162 103 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 RNU6-818P-201ENST00000364837 108 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 RNU6-440P-201ENST00000390882 105 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 RNA5SP450-201ENST00000411206 102 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 TMSB4XP3-201ENST00000445144 114 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 AC245884.12-201ENST00000615364 59 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 AC091953.5-201ENST00000622919 233 ntBASIC2.84□□□□□ -1.95
VTI1BQ9UEU0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.96
VTI1BQ9UEU0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 RNU1-51P-201ENST00000365345 176 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 Y_RNA.343-201ENST00000365354 112 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 SNORA9.2-201ENST00000365361 133 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 RNU6-597P-201ENST00000365620 102 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 RPL23AP83-201ENST00000434984 473 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 S100A11P2-201ENST00000467589 312 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 SNORA28-201ENST00000606769 126 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 U1.36-201ENST00000620684 176 ntBASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
VTI1BQ9UEU0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 RNU6-199P-201ENST00000362954 107 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 Y_RNA.486-201ENST00000384398 107 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 RNU6-950P-201ENST00000384651 107 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 MIR520A-201ENST00000384862 85 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 SNORD37.2-201ENST00000391075 66 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 STAG3L5P-204ENST00000443759 179 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 RNA5SP341-201ENST00000516261 117 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 SNORA31.10-201ENST00000516482 106 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 MIR548X2-201ENST00000579776 100 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 MIR3200-201ENST00000580767 85 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
VTI1BQ9UEU0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 RNU6-978P-201ENST00000364371 103 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 MIR569-201ENST00000385228 96 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 SNORD72-201ENST00000390994 80 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 HSPE1P9-201ENST00000440046 311 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 RPL39P40-201ENST00000445481 146 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 SNORA74D-201ENST00000516404 141 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 RNU1-104P-201ENST00000517280 175 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 MIR4446-201ENST00000578505 67 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 AC120024.3-201ENST00000603167 156 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 MIR6844-201ENST00000637122 62 ntBASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VTI1BQ9UEU0 RNU6-112P-201ENST00000363599 104 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 SNORA75.5-201ENST00000391291 81 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 RN7SKP200-201ENST00000410564 320 ntBASIC2.8□□□□□ -1.96
VTI1BQ9UEU0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms