Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 MIR449C-201ENST00000516047 92 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 RNU6-412P-201ENST00000516434 106 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 RNU1-104P-201ENST00000517280 175 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 AC026241.1-201ENST00000517873 2142 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 AC105245.1-201ENST00000581934 244 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 AL035470.1-201ENST00000622571 220 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 AC010889.1-201ENST00000566193 2666 ntBASIC2.73□□□□□ -1.97
SMPD4Q9NXE4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 Y_RNA.66-201ENST00000362862 102 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 RNU6-271P-201ENST00000363858 105 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 SNORA51.5-201ENST00000384126 131 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 RNU1-57P-201ENST00000384491 166 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 Y_RNA.558-201ENST00000384685 113 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 SNORA26.7-201ENST00000391288 122 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 MIR1283-1-201ENST00000408494 87 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 RNA5SP127-201ENST00000411051 133 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 AC016717.1-201ENST00000448918 286 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 AC080013.2-201ENST00000460866 323 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 SNORA18.4-201ENST00000516440 124 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 RNU6-56P-201ENST00000516986 93 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 AC002064.3-201ENST00000623448 346 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 AC110079.1-202ENST00000635213 138 ntBASIC2.72□□□□□ -1.97
SMPD4Q9NXE4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
SMPD4Q9NXE4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP173-201ENST00000364857 136 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 SNORA1-201ENST00000384107 130 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 MIR147B-201ENST00000390185 80 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 AC104332.2-201ENST00000429959 156 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 RNU6-221P-201ENST00000459541 99 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 AC025647.1-201ENST00000517879 253 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 AP003327.1-201ENST00000529684 127 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 AL365205.2-201ENST00000594586 68 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SMPD4Q9NXE4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 RNY1P7-201ENST00000384743 110 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 MIR562-201ENST00000384894 95 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 MIR570-201ENST00000384917 97 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 AF228730.3-201ENST00000436691 102 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 RPS4XP11-201ENST00000446897 772 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 RNU7-149P-201ENST00000516739 59 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 RNU6-365P-201ENST00000517113 106 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 MIR4435-1-201ENST00000582552 80 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 MIR1245B-201ENST00000636115 69 ntBASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SMPD4Q9NXE4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-1209P-201ENST00000363655 107 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-573P-201ENST00000383938 106 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-1014P-201ENST00000383940 103 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-440P-201ENST00000390882 105 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-57P-201ENST00000411348 103 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 AC016909.1-201ENST00000415916 166 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RN7SL429P-201ENST00000479090 223 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RN7SL489P-201ENST00000486185 223 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RN7SL327P-201ENST00000488659 223 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 ATP5EP1-201ENST00000510257 156 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU6-638P-201ENST00000516582 104 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 MIR3129-201ENST00000581095 76 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 Pinc.1-201ENST00000616452 154 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RN7SL853P-201ENST00000617250 223 ntBASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
SMPD4Q9NXE4 RNU4-13P-201ENST00000364019 141 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNU6-975P-201ENST00000384296 105 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP354-201ENST00000391247 136 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP508-201ENST00000411327 119 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNU6-592P-201ENST00000411333 103 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 Z96811.1-201ENST00000445880 108 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNU7-14P-201ENST00000459331 62 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RPL39P34-201ENST00000477141 156 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNA5SP282-201ENST00000516355 108 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNU6-109P-201ENST00000516364 107 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 SNORA40.13-201ENST00000516379 120 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 RNU6-184P-201ENST00000516514 107 ntBASIC2.68□□□□□ -1.98
SMPD4Q9NXE4 AC079598.5-201ENST00000547460 117 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms