Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 MIR3651-201ENST00000630427 90 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 SNORA33-201ENST00000363664 130 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-979P-201ENST00000383896 107 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-787P-201ENST00000384032 107 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 MIR1253-201ENST00000408273 105 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AC073261.1-201ENST00000429409 121 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AC025750.2-201ENST00000442609 450 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AC104389.3-201ENST00000445629 235 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AP001486.1-201ENST00000463339 476 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 RN7SKP83-201ENST00000516512 178 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 MIR4778-201ENST00000577635 80 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 MIR4694-201ENST00000578534 80 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AC093908.1-201ENST00000623125 8092 ntBASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CUEDC1Q9NWM3 AL035425.3-201ENST00000564206 4996 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 MIR548O-201ENST00000408583 114 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 FTH1P12-201ENST00000432137 551 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 RPS15AP28-201ENST00000435088 386 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 AC104619.4-201ENST00000510773 249 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 RN7SKP57-201ENST00000517248 293 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 AC022523.2-201ENST00000561045 150 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 AC073413.2-201ENST00000604332 360 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 AC006441.5-201ENST00000612680 209 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 U7.3-201ENST00000616123 62 ntBASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.51□□□□□ -1.85
CUEDC1Q9NWM3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-24P-201ENST00000384440 107 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 RNU7-171P-201ENST00000459581 62 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 AC010401.1-201ENST00000463867 348 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-857P-201ENST00000515893 110 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 SNORA4.4-201ENST00000515921 135 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 RNU7-99P-201ENST00000516271 62 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 RNU7-6P-201ENST00000516845 62 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 MIR5588-201ENST00000581890 63 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 U2.20-201ENST00000613956 192 ntBASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
CUEDC1Q9NWM3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 Y_RNA.73-201ENST00000362910 113 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 SNORD116-22-201ENST00000384430 92 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 MIR802-201ENST00000390235 94 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-644P-201ENST00000391155 98 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 HMGN2P18-201ENST00000450680 270 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AC233266.1-201ENST00000454518 96 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 SNORD105B-201ENST00000458770 79 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 RNU7-80P-201ENST00000459562 61 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 SNORA70.18-201ENST00000516696 98 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 MIR3124-201ENST00000582636 67 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AC022217.4-201ENST00000604389 163 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AC242852.1-201ENST00000612151 96 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 RNVU1-4-201ENST00000612985 164 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AC244015.1-201ENST00000622301 99 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 AL355596.1-201ENST00000565399 3996 ntBASIC3.49□□□□□ -1.85
CUEDC1Q9NWM3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 MIR126-201ENST00000362291 85 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-661P-201ENST00000362409 107 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 SNORD9-201ENST00000362566 104 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-170P-201ENST00000362832 104 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-832P-201ENST00000363319 107 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 SNORD115-28-201ENST00000363931 81 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 Y_RNA.454-201ENST00000384224 113 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 MIR561-201ENST00000385216 97 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU2-11P-201ENST00000459191 187 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-856P-201ENST00000516959 98 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 RNU6-341P-201ENST00000516973 96 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 AC091544.4-201ENST00000555268 342 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 MIR4662A-201ENST00000637499 67 ntBASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.48□□□□□ -1.85
CUEDC1Q9NWM3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms