Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 Y_RNA.692-201ENST00000516627 105 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 RNU7-149P-201ENST00000516739 59 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 MIR4662B-201ENST00000579498 81 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 AC131055.1-201ENST00000584626 316 ntBASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.9□□□□□ -1.95
FOXP3Q9BZS1 RNU6-153P-201ENST00000364422 104 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RNU6-1064P-201ENST00000410626 104 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 OR9P1P-201ENST00000496431 281 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RN7SKP132-201ENST00000516001 208 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RNU6-1146P-201ENST00000516282 102 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RNA5SP367-201ENST00000516557 118 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RNU6-826P-201ENST00000516827 104 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 RNU6-1096P-201ENST00000517089 102 ntBASIC2.89□□□□□ -1.95
FOXP3Q9BZS1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 RNU6-235P-201ENST00000362644 107 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 RNU6-476P-201ENST00000384726 107 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 HMGN2P34-201ENST00000437647 269 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 MIR3121-201ENST00000579680 77 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 JPX_2.1-201ENST00000614161 69 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 Pinc.1-201ENST00000616452 154 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 MIR3914-2-201ENST00000637339 95 ntBASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
FOXP3Q9BZS1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 RNU6-1144P-201ENST00000384247 104 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 RNU6-429P-201ENST00000384582 108 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AC105272.1-201ENST00000438604 198 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AL158147.1-201ENST00000443970 75 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AC011406.1-201ENST00000512440 370 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 RNU6-772P-201ENST00000516042 105 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AC091178.2-201ENST00000584401 117 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 ZNF861P-201ENST00000588126 639 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 AC073413.2-201ENST00000604332 360 ntBASIC2.87□□□□□ -1.95
FOXP3Q9BZS1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 RNU7-99P-201ENST00000516271 62 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 RNU2-60P-201ENST00000517290 128 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 MIR4319-201ENST00000577285 85 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 ELOCP29-201ENST00000588193 334 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 AC007229.1-201ENST00000590455 412 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 AL365205.2-201ENST00000594586 68 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 AL355297.2-201ENST00000604792 129 ntBASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
FOXP3Q9BZS1 AL136360.1-201ENST00000503377 1900 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 RNA5SP126-201ENST00000365092 109 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 RNU6-301P-201ENST00000384277 107 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MIR561-201ENST00000385216 97 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 RNU6-220P-201ENST00000390919 107 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 AL603914.1-201ENST00000401964 204 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MLLT10P1-201ENST00000418346 262 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 AC003685.2-201ENST00000422795 395 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 AL353689.1-201ENST00000438895 199 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 AC018868.1-201ENST00000491307 315 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
FOXP3Q9BZS1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 Y_RNA.114-201ENST00000363265 113 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 MIR624-201ENST00000385217 97 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 SNORA40.5-201ENST00000391061 128 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RNY4P18-201ENST00000391107 89 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RNU11-5P-201ENST00000391216 129 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RPS15AP28-201ENST00000435088 386 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RN7SL429P-201ENST00000479090 223 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RN7SL489P-201ENST00000486185 223 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RN7SL327P-201ENST00000488659 223 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RNU6-365P-201ENST00000517113 106 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 AC007751.1-201ENST00000529260 376 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 CYCSP26-201ENST00000534107 320 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 MIR6129-201ENST00000616087 109 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 RN7SL853P-201ENST00000617250 223 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 U6.95-201ENST00000636931 70 ntBASIC2.84□□□□□ -1.95
FOXP3Q9BZS1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.83□□□□□ -1.96
FOXP3Q9BZS1 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms