Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 SNORA38-201ENST00000363946 132 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 RNU4-13P-201ENST00000364019 141 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 SNORD114-30-201ENST00000364448 72 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 RNU6-417P-201ENST00000384712 107 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.568-201ENST00000384742 113 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 MIR569-201ENST00000385228 96 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 MIR548I2-201ENST00000408348 149 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 SRIP3-201ENST00000413200 219 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC010154.1-201ENST00000425857 269 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 SNRPGP8-201ENST00000454064 226 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC107027.2-201ENST00000512197 115 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 RNA5SP272-201ENST00000516095 111 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AP001485.1-201ENST00000604799 199 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 U6.108-201ENST00000637764 58 ntBASIC2.32□□□□□ -2.04
PTCD3Q96EY7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
PTCD3Q96EY7 snoU2-30.2-201ENST00000362805 70 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 RNU6-643P-201ENST00000384018 107 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 MIR1253-201ENST00000408273 105 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 RNU4-43P-201ENST00000410628 137 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 AC006461.1-201ENST00000412637 326 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.31□□□□□ -2.04
PTCD3Q96EY7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 MIR1291-201ENST00000627649 87 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 MIR338-201ENST00000636369 67 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.31□□□□□ -2.04
PTCD3Q96EY7 AP000553.5-201ENST00000641933 54 ntBASIC2.31□□□□□ -2.04
PTCD3Q96EY7 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTCD3Q96EY7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PTCD3Q96EY7 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNU4-41P-201ENST00000364426 143 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNU6-728P-201ENST00000365375 104 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNY3P5-201ENST00000384127 102 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.497-201ENST00000384447 98 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNA5SP496-201ENST00000391240 109 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNA5SP467-201ENST00000391274 118 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AL117342.1-201ENST00000404861 406 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AL353689.1-201ENST00000438895 199 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNU6-426P-201ENST00000516464 97 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 RNA5SP24-201ENST00000516478 95 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCD3Q96EY7 MIR3162-201ENST00000581818 82 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC103810.6-201ENST00000606708 136 ntBASIC2.3□□□□□ -2.04
PTCD3Q96EY7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
PTCD3Q96EY7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
PTCD3Q96EY7 ZNF702P-202ENST00000434269 1966 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 SNORD45.3-201ENST00000363836 72 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 RNU4-11P-201ENST00000365287 132 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 RNU6-376P-201ENST00000384731 106 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.587-201ENST00000391210 103 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.622-201ENST00000411091 108 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 AC009238.1-201ENST00000442165 424 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 AC009237.6-201ENST00000446969 424 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 RNU1-131P-201ENST00000458943 161 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 RNU7-99P-201ENST00000516271 62 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 AC011604.1-201ENST00000545978 196 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 AC073413.2-201ENST00000604332 360 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 U4atac.1-201ENST00000618345 95 ntBASIC2.29□□□□□ -2.04
PTCD3Q96EY7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.29□□□□□ -2.04
PTCD3Q96EY7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PTCD3Q96EY7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTCD3Q96EY7 SNORA33-201ENST00000363664 130 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.337-201ENST00000365312 102 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 Y_RNA.586-201ENST00000391146 98 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AC234781.5-201ENST00000508429 271 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 MIR548X2-201ENST00000579776 100 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AC091178.2-201ENST00000584401 117 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AL031274.2-201ENST00000599419 203 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AL049861.1-201ENST00000603130 150 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AL353149.1-201ENST00000610667 244 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 AC100821.1-201ENST00000523153 2479 ntBASIC2.28□□□□□ -2.04
PTCD3Q96EY7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
PTCD3Q96EY7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RNY1P11-201ENST00000363759 113 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RNU6-768P-201ENST00000384683 107 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RNU6-257P-201ENST00000410238 98 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms