Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 RNU6-855P-201ENST00000410395 104 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCE1Q969G3 SEPT14P8-201ENST00000508026 178 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 RNA5SP61-201ENST00000516453 100 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.63□□□□□ -2.15
SMARCE1Q969G3 AP003072.1-201ENST00000531740 145 ntBASIC1.63□□□□□ -2.15
SMARCE1Q969G3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SMARCE1Q969G3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.310-201ENST00000365063 113 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 MIR562-201ENST00000384894 95 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 MIR513A1-201ENST00000385138 129 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 SNORA67.6-201ENST00000391093 99 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 MIR1289-2-201ENST00000408360 111 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AL354695.1-201ENST00000427935 228 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 CALM2P4-201ENST00000430810 426 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AC098869.1-201ENST00000481627 292 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 RNU6-496P-201ENST00000516145 99 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 RNU6-764P-201ENST00000516396 105 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 SUMO2P16-201ENST00000519475 264 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AL355297.3-201ENST00000604082 446 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 AC073349.3-201ENST00000617616 186 ntBASIC1.62□□□□□ -2.15
SMARCE1Q969G3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SMARCE1Q969G3 RNU4-80P-201ENST00000363200 141 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU4-13P-201ENST00000364019 141 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.222-201ENST00000364264 102 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU4-41P-201ENST00000364426 143 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU6-639P-201ENST00000384074 107 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU6-985P-201ENST00000410182 104 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU6-710P-201ENST00000410424 105 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 AC113618.1-201ENST00000416747 285 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 POLR2KP2-201ENST00000438155 177 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 Z98949.2-201ENST00000440996 144 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 LINC01399-202ENST00000458450 244 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 HMGN1P10-201ENST00000474557 553 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.61□□□□□ -2.15
SMARCE1Q969G3 RNU6-548P-201ENST00000517083 115 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 AC019176.1-201ENST00000518519 225 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.61□□□□□ -2.15
SMARCE1Q969G3 AL162424.1-201ENST00000602325 221 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 SNORA28-201ENST00000606769 126 ntBASIC1.61□□□□□ -2.15
SMARCE1Q969G3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.61□□□□□ -2.15
SMARCE1Q969G3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.368-201ENST00000365547 113 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.418-201ENST00000384029 102 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 RNU1-78P-201ENST00000391248 165 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 U8.16-201ENST00000391279 133 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 RPL21P38-201ENST00000418090 167 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AL049830.1-201ENST00000468034 425 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 RNA5SP168-201ENST00000516642 112 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 SNORA40.15-201ENST00000516884 107 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AL358944.1-201ENST00000528537 144 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AC011604.1-201ENST00000545978 196 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AC005972.2-201ENST00000604690 348 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 AL513423.1-201ENST00000621695 132 ntBASIC1.6□□□□□ -2.15
SMARCE1Q969G3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SMARCE1Q969G3 MIRLET7C-201ENST00000362160 84 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 snoU2_19.2-201ENST00000363024 80 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 RNU6-770P-201ENST00000363929 105 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 RNU6-60P-201ENST00000364792 103 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 RNA5SP259-201ENST00000365541 109 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 MIR215-201ENST00000384858 110 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
SMARCE1Q969G3 Y_RNA.581-201ENST00000391017 97 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 RNU6-955P-201ENST00000410497 104 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 AC027119.1-201ENST00000440877 241 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 SNRPGP13-201ENST00000442212 177 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 RNY3P15-201ENST00000516297 97 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 MIR4778-201ENST00000577635 80 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 AL365434.2-201ENST00000607979 234 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 SNORD3E-202ENST00000627253 216 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 AC068647.2-201ENST00000637380 353 ntBASIC1.59□□□□□ -2.15
SMARCE1Q969G3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
SMARCE1Q969G3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 U8.1-201ENST00000362843 134 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 MIR660-201ENST00000385235 97 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 RNA5SP482-201ENST00000391269 118 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 RPS27P16-201ENST00000425758 201 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 AC079140.2-201ENST00000506193 142 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 MRPS35P2-201ENST00000508242 191 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 RNU7-28P-201ENST00000516759 62 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 MIR4422-201ENST00000581938 83 ntBASIC1.58□□□□□ -2.16
SMARCE1Q969G3 Y_RNA.456-201ENST00000384232 111 ntBASIC1.57□□□□□ -2.16
SMARCE1Q969G3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.57□□□□□ -2.16
SMARCE1Q969G3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms