Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 AL136360.1-201ENST00000503377 1900 ntBASIC2.66□□□□□ -1.98
HOXC12P31275 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXC12P31275 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HOXC12P31275 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
HOXC12P31275 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
HOXC12P31275 SNORA54-201ENST00000384281 123 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 RNU11-3P-201ENST00000391111 133 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 RPL30P13-201ENST00000418873 348 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC12P31275 AL139132.1-201ENST00000431587 344 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 SNRPGP10-201ENST00000432323 225 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC12P31275 AC011753.1-201ENST00000451001 220 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.65□□□□□ -1.99
HOXC12P31275 AL049830.1-201ENST00000468034 425 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 RPS26P45-201ENST00000471748 340 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 OR9P1P-201ENST00000496431 281 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 SNORD77.4-201ENST00000516158 81 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 RNU7-149P-201ENST00000516739 59 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 SCARNA20.6-201ENST00000517251 106 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.65□□□□□ -1.99
HOXC12P31275 Y_RNA.253-201ENST00000364562 112 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 RNU6-81P-201ENST00000365608 104 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 Y_RNA.393-201ENST00000383936 102 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 RNU1-52P-201ENST00000384190 164 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC12P31275 RNU6-588P-201ENST00000410281 105 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 RNU1-143P-201ENST00000516296 146 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 AL358944.1-201ENST00000528537 144 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC12P31275 MIR3646-201ENST00000578301 84 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.64□□□□□ -1.99
HOXC12P31275 AC005786.1-201ENST00000588553 154 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 U1.23-201ENST00000610293 146 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 RNU1-68P-201ENST00000615382 146 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 U1.39-201ENST00000621562 146 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC12P31275 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.64□□□□□ -1.99
HOXC12P31275 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC12P31275 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HOXC12P31275 AC108206.1-201ENST00000570186 4159 ntBASIC2.64□□□□□ -1.99
HOXC12P31275 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXC12P31275 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HOXC12P31275 RNU4-82P-201ENST00000362443 140 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 SNORA1B-201ENST00000362535 133 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 SNORA20-201ENST00000384662 132 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 SNORA12.1-201ENST00000390873 148 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 RNA5SP184-201ENST00000411071 108 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 CYCSP49-201ENST00000420810 319 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 UQCRHP3-201ENST00000451503 251 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 RNU2-56P-201ENST00000516826 190 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 AP002004.2-201ENST00000531656 154 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 MIR4435-1-201ENST00000582552 80 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.63□□□□□ -1.99
HOXC12P31275 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.63□□□□□ -1.99
HOXC12P31275 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HOXC12P31275 AC010332.2-201ENST00000613083 1904 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 MIR126-201ENST00000362291 85 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 Y_RNA.634-201ENST00000364811 113 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 RNU6-851P-201ENST00000384565 107 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 MIR1261-201ENST00000408659 82 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC12P31275 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC12P31275 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXC12P31275 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC12P31275 RN7SL633P-201ENST00000488974 297 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 NDUFA4P2-201ENST00000489989 244 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXC12P31275 RNA5SP153-201ENST00000516498 76 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 SNORA31.15-201ENST00000516771 132 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 AC022513.1-201ENST00000624512 117 ntBASIC2.62□□□□□ -1.99
HOXC12P31275 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HOXC12P31275 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC12P31275 Y_RNA.91-201ENST00000363042 107 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 Y_RNA.486-201ENST00000384398 107 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 MIR597-201ENST00000384968 97 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 RNU6-257P-201ENST00000410238 98 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXC12P31275 AC105272.1-201ENST00000438604 198 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXC12P31275 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 Y_RNA.714-201ENST00000517065 90 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 AL160236.1-201ENST00000556317 195 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 MIR4319-201ENST00000577285 85 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 MIR4662B-201ENST00000579498 81 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 AC120024.3-201ENST00000603167 156 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 AL591926.4-201ENST00000616895 298 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.61□□□□□ -1.99
HOXC12P31275 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.61□□□□□ -1.99
HOXC12P31275 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXC12P31275 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms