Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MIR3144-201ENST00000579460 79 ntBASIC2.37□□□□□ -2.03
CD40P25942 MIR4431-201ENST00000579990 94 ntBASIC2.37□□□□□ -2.03
CD40P25942 MIR4513-201ENST00000581077 86 ntBASIC2.37□□□□□ -2.03
CD40P25942 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.37□□□□□ -2.03
CD40P25942 uc_338.4-201ENST00000616635 176 ntBASIC2.37□□□□□ -2.03
CD40P25942 AL591926.4-201ENST00000616895 298 ntBASIC2.37□□□□□ -2.03
CD40P25942 AC012640.5-201ENST00000623897 319 ntBASIC2.37□□□□□ -2.03
CD40P25942 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.36□□□□□ -2.03
CD40P25942 MIR126-201ENST00000362291 85 ntBASIC2.36□□□□□ -2.03
CD40P25942 SNORD45.3-201ENST00000363836 72 ntBASIC2.36□□□□□ -2.03
CD40P25942 RNU4-84P-201ENST00000364200 139 ntBASIC2.36□□□□□ -2.03
CD40P25942 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
CD40P25942 MIR548M-201ENST00000408260 86 ntBASIC2.36□□□□□ -2.03
CD40P25942 MLLT10P1-201ENST00000418346 262 ntBASIC2.36□□□□□ -2.03
CD40P25942 MTND2P29-201ENST00000438595 412 ntBASIC2.36□□□□□ -2.03
CD40P25942 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.36□□□□□ -2.03
CD40P25942 AC069257.2-201ENST00000441819 155 ntBASIC2.36□□□□□ -2.03
CD40P25942 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
CD40P25942 AC003982.1-202ENST00000469928 248 ntBASIC2.36□□□□□ -2.03
CD40P25942 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
CD40P25942 CTSLP2-204ENST00000629029 392 ntBASIC2.36□□□□□ -2.03
CD40P25942 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
CD40P25942 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CD40P25942 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CD40P25942 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
CD40P25942 AL136360.1-201ENST00000503377 1900 ntBASIC2.35□□□□□ -2.03
CD40P25942 RNU6-774P-201ENST00000363238 107 ntBASIC2.35□□□□□ -2.03
CD40P25942 Y_RNA.398-201ENST00000383952 99 ntBASIC2.35□□□□□ -2.03
CD40P25942 SNORA12.1-201ENST00000390873 148 ntBASIC2.35□□□□□ -2.03
CD40P25942 AC006461.1-201ENST00000412637 326 ntBASIC2.35□□□□□ -2.03
CD40P25942 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
CD40P25942 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.35□□□□□ -2.03
CD40P25942 SNRPGP8-201ENST00000454064 226 ntBASIC2.35□□□□□ -2.03
CD40P25942 AC005840.1-201ENST00000498412 377 ntBASIC2.35□□□□□ -2.03
CD40P25942 RNU1-104P-201ENST00000517280 175 ntBASIC2.35□□□□□ -2.03
CD40P25942 MTND5P41-201ENST00000517498 206 ntBASIC2.35□□□□□ -2.03
CD40P25942 MIR3605-201ENST00000583214 100 ntBASIC2.35□□□□□ -2.03
CD40P25942 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.35□□□□□ -2.03
CD40P25942 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CD40P25942 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CD40P25942 SNORD68-201ENST00000363214 84 ntBASIC2.34□□□□□ -2.03
CD40P25942 Y_RNA.170-201ENST00000363746 110 ntBASIC2.34□□□□□ -2.03
CD40P25942 RNU6-643P-201ENST00000384018 107 ntBASIC2.34□□□□□ -2.03
CD40P25942 NDUFA4P2-201ENST00000489989 244 ntBASIC2.34□□□□□ -2.03
CD40P25942 AC096725.1-201ENST00000514266 313 ntBASIC2.34□□□□□ -2.03
CD40P25942 SNORA9.3-201ENST00000516383 129 ntBASIC2.34□□□□□ -2.03
CD40P25942 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.34□□□□□ -2.03
CD40P25942 MIR8054-201ENST00000620877 86 ntBASIC2.34□□□□□ -2.03
CD40P25942 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
CD40P25942 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CD40P25942 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CD40P25942 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CD40P25942 Y_RNA.265-201ENST00000364677 108 ntBASIC2.33□□□□□ -2.04
CD40P25942 RNU6-1130P-201ENST00000365434 107 ntBASIC2.33□□□□□ -2.04
CD40P25942 SNORD116-18-201ENST00000383961 92 ntBASIC2.33□□□□□ -2.04
CD40P25942 RNU6-440P-201ENST00000390882 105 ntBASIC2.33□□□□□ -2.04
CD40P25942 RN7SKP123-201ENST00000410732 291 ntBASIC2.33□□□□□ -2.04
CD40P25942 RNA5SP344-201ENST00000411081 104 ntBASIC2.33□□□□□ -2.04
CD40P25942 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.33□□□□□ -2.04
CD40P25942 STAG3L5P-204ENST00000443759 179 ntBASIC2.33□□□□□ -2.04
CD40P25942 AC107027.2-201ENST00000512197 115 ntBASIC2.33□□□□□ -2.04
CD40P25942 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
CD40P25942 SNORD77.4-201ENST00000516158 81 ntBASIC2.33□□□□□ -2.04
CD40P25942 RNU7-149P-201ENST00000516739 59 ntBASIC2.33□□□□□ -2.04
CD40P25942 SUB1P4-201ENST00000566062 339 ntBASIC2.33□□□□□ -2.04
CD40P25942 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CD40P25942 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CD40P25942 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CD40P25942 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CD40P25942 SNORA63D-201ENST00000364359 132 ntBASIC2.32□□□□□ -2.04
CD40P25942 RNU1-51P-201ENST00000365345 176 ntBASIC2.32□□□□□ -2.04
CD40P25942 Y_RNA.432-201ENST00000384087 111 ntBASIC2.32□□□□□ -2.04
CD40P25942 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
CD40P25942 RNU6-239P-201ENST00000390990 99 ntBASIC2.32□□□□□ -2.04
CD40P25942 RNU6-131P-201ENST00000391144 107 ntBASIC2.32□□□□□ -2.04
CD40P25942 SNORA79-201ENST00000408376 140 ntBASIC2.32□□□□□ -2.04
CD40P25942 RNU2-7P-201ENST00000410794 178 ntBASIC2.32□□□□□ -2.04
CD40P25942 SUMO1P4-201ENST00000429430 302 ntBASIC2.32□□□□□ -2.04
CD40P25942 HSPE1P9-201ENST00000440046 311 ntBASIC2.32□□□□□ -2.04
CD40P25942 SNORA31.10-201ENST00000516482 106 ntBASIC2.32□□□□□ -2.04
CD40P25942 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
CD40P25942 U1.36-201ENST00000620684 176 ntBASIC2.32□□□□□ -2.04
CD40P25942 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
CD40P25942 RNU6-112P-201ENST00000363599 104 ntBASIC2.31□□□□□ -2.04
CD40P25942 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
CD40P25942 SNORA4.2-201ENST00000365313 147 ntBASIC2.31□□□□□ -2.04
CD40P25942 RNU6-484P-201ENST00000384016 107 ntBASIC2.31□□□□□ -2.04
CD40P25942 Y_RNA.506-201ENST00000384494 102 ntBASIC2.31□□□□□ -2.04
CD40P25942 MIR520A-201ENST00000384862 85 ntBASIC2.31□□□□□ -2.04
CD40P25942 MIR522-201ENST00000385071 87 ntBASIC2.31□□□□□ -2.04
CD40P25942 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
CD40P25942 SNORD23.1-201ENST00000408212 104 ntBASIC2.31□□□□□ -2.04
CD40P25942 RNU4-43P-201ENST00000410628 137 ntBASIC2.31□□□□□ -2.04
CD40P25942 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.31□□□□□ -2.04
CD40P25942 RPS29P6-201ENST00000438196 145 ntBASIC2.31□□□□□ -2.04
CD40P25942 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.31□□□□□ -2.04
CD40P25942 OR9P1P-201ENST00000496431 281 ntBASIC2.31□□□□□ -2.04
CD40P25942 RNU6-1299P-201ENST00000516316 100 ntBASIC2.31□□□□□ -2.04
CD40P25942 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
CD40P25942 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms