Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
NID1P14543 SNORD14E-201ENST00000364009 85 ntBASIC3.17□□□□□ -1.9
NID1P14543 Y_RNA.332-201ENST00000365271 113 ntBASIC3.17□□□□□ -1.9
NID1P14543 SNORA4.2-201ENST00000365313 147 ntBASIC3.17□□□□□ -1.9
NID1P14543 RNU6-497P-201ENST00000365316 104 ntBASIC3.17□□□□□ -1.9
NID1P14543 RNU6-1276P-201ENST00000365372 104 ntBASIC3.17□□□□□ -1.9
NID1P14543 Y_RNA.440-201ENST00000384120 114 ntBASIC3.17□□□□□ -1.9
NID1P14543 Y_RNA.531-201ENST00000384589 121 ntBASIC3.17□□□□□ -1.9
NID1P14543 AL445646.1-201ENST00000431784 216 ntBASIC3.17□□□□□ -1.9
NID1P14543 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
NID1P14543 RNU7-80P-201ENST00000459562 61 ntBASIC3.17□□□□□ -1.9
NID1P14543 SCARNA17.1-201ENST00000516211 143 ntBASIC3.17□□□□□ -1.9
NID1P14543 SCARNA17.2-201ENST00000516334 143 ntBASIC3.17□□□□□ -1.9
NID1P14543 RNU2-35P-201ENST00000516446 142 ntBASIC3.17□□□□□ -1.9
NID1P14543 SNORA18.7-201ENST00000516910 131 ntBASIC3.17□□□□□ -1.9
NID1P14543 RN7SKP57-201ENST00000517248 293 ntBASIC3.17□□□□□ -1.9
NID1P14543 SCARNA17.4-201ENST00000614296 143 ntBASIC3.17□□□□□ -1.9
NID1P14543 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.17□□□□□ -1.9
NID1P14543 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NID1P14543 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NID1P14543 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
NID1P14543 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
NID1P14543 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NID1P14543 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NID1P14543 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NID1P14543 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NID1P14543 Y_RNA.244-201ENST00000364484 109 ntBASIC3.16□□□□□ -1.9
NID1P14543 Y_RNA.351-201ENST00000365436 96 ntBASIC3.16□□□□□ -1.9
NID1P14543 Y_RNA.454-201ENST00000384224 113 ntBASIC3.16□□□□□ -1.9
NID1P14543 Y_RNA.547-201ENST00000384654 119 ntBASIC3.16□□□□□ -1.9
NID1P14543 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.16□□□□□ -1.9
NID1P14543 AC006539.3-201ENST00000454258 129 ntBASIC3.16□□□□□ -1.9
NID1P14543 AL049830.1-201ENST00000468034 425 ntBASIC3.16□□□□□ -1.9
NID1P14543 AC113410.1-201ENST00000505029 247 ntBASIC3.16□□□□□ -1.9
NID1P14543 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
NID1P14543 RNU6-65P-201ENST00000516332 98 ntBASIC3.16□□□□□ -1.9
NID1P14543 RNA5SP367-201ENST00000516557 118 ntBASIC3.16□□□□□ -1.9
NID1P14543 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.16□□□□□ -1.9
NID1P14543 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.16□□□□□ -1.9
NID1P14543 U7.3-201ENST00000616123 62 ntBASIC3.16□□□□□ -1.9
NID1P14543 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
NID1P14543 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NID1P14543 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NID1P14543 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.15□□□□□ -1.91
NID1P14543 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
NID1P14543 Y_RNA.221-201ENST00000364248 96 ntBASIC3.15□□□□□ -1.91
NID1P14543 RNU6-644P-201ENST00000391155 98 ntBASIC3.15□□□□□ -1.91
NID1P14543 RNA5SP467-201ENST00000391274 118 ntBASIC3.15□□□□□ -1.91
NID1P14543 AC096949.1-201ENST00000412047 152 ntBASIC3.15□□□□□ -1.91
NID1P14543 AL161788.1-201ENST00000441805 169 ntBASIC3.15□□□□□ -1.91
NID1P14543 RNU6-991P-201ENST00000516168 107 ntBASIC3.15□□□□□ -1.91
NID1P14543 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
NID1P14543 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
NID1P14543 NDUFB9P3-201ENST00000521269 501 ntBASIC3.15□□□□□ -1.91
NID1P14543 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.15□□□□□ -1.91
NID1P14543 AP002004.2-201ENST00000531656 154 ntBASIC3.15□□□□□ -1.91
NID1P14543 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.15□□□□□ -1.91
NID1P14543 MIR4694-201ENST00000578534 80 ntBASIC3.15□□□□□ -1.91
NID1P14543 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.15□□□□□ -1.91
NID1P14543 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.15□□□□□ -1.91
NID1P14543 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NID1P14543 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.15□□□□□ -1.91
NID1P14543 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
NID1P14543 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NID1P14543 RNU6-1077P-201ENST00000410506 102 ntBASIC3.14□□□□□ -1.91
NID1P14543 AC004941.2-201ENST00000427009 228 ntBASIC3.14□□□□□ -1.91
NID1P14543 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
NID1P14543 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
NID1P14543 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.14□□□□□ -1.91
NID1P14543 RNU6-162P-201ENST00000516228 103 ntBASIC3.14□□□□□ -1.91
NID1P14543 AP003484.1-201ENST00000530974 250 ntBASIC3.14□□□□□ -1.91
NID1P14543 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.14□□□□□ -1.91
NID1P14543 AC091932.4-201ENST00000623386 200 ntBASIC3.14□□□□□ -1.91
NID1P14543 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
NID1P14543 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NID1P14543 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NID1P14543 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NID1P14543 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NID1P14543 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
NID1P14543 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NID1P14543 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
NID1P14543 AC091564.4-201ENST00000533934 2194 ntBASIC3.13□□□□□ -1.91
NID1P14543 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.13□□□□□ -1.91
NID1P14543 RNU6-1084P-201ENST00000362498 107 ntBASIC3.13□□□□□ -1.91
NID1P14543 SNORA1B-201ENST00000362535 133 ntBASIC3.13□□□□□ -1.91
NID1P14543 RNU6-170P-201ENST00000362832 104 ntBASIC3.13□□□□□ -1.91
NID1P14543 Y_RNA.73-201ENST00000362910 113 ntBASIC3.13□□□□□ -1.91
NID1P14543 SNORD68-201ENST00000363214 84 ntBASIC3.13□□□□□ -1.91
NID1P14543 Y_RNA.155-201ENST00000363632 101 ntBASIC3.13□□□□□ -1.91
NID1P14543 RNU6-268P-201ENST00000364174 107 ntBASIC3.13□□□□□ -1.91
NID1P14543 SNORA14A-201ENST00000364773 135 ntBASIC3.13□□□□□ -1.91
NID1P14543 snoU2-30.1-201ENST00000365012 70 ntBASIC3.13□□□□□ -1.91
NID1P14543 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
NID1P14543 RNU6-938P-201ENST00000411285 103 ntBASIC3.13□□□□□ -1.91
NID1P14543 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms