Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 RNU1-104P-201ENST00000517280 175 ntBASIC3.36□□□□□ -1.87
TNFRSF11AQ9Y6Q6 ELOCP29-201ENST00000588193 334 ntBASIC3.36□□□□□ -1.87
TNFRSF11AQ9Y6Q6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.36□□□□□ -1.87
TNFRSF11AQ9Y6Q6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.36□□□□□ -1.87
TNFRSF11AQ9Y6Q6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFRSF11AQ9Y6Q6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNY1P11-201ENST00000363759 113 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNU2-63P-201ENST00000410792 194 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNA5SP127-201ENST00000411051 133 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RPS15AP28-201ENST00000435088 386 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 CKS1BP2-201ENST00000497342 240 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNU6-772P-201ENST00000516042 105 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNU6-589P-201ENST00000516485 107 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 AC087685.1-201ENST00000587507 141 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 ZNF861P-201ENST00000588126 639 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 Pinc.1-201ENST00000616452 154 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 MIR7515-201ENST00000637837 67 ntBASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
TNFRSF11AQ9Y6Q6 U8.1-201ENST00000362843 134 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 FO393413.1-201ENST00000402892 195 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNA5SP21-201ENST00000410917 96 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 RNU7-99P-201ENST00000516271 62 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 SNORA18.4-201ENST00000516440 124 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 Y_RNA.714-201ENST00000517065 90 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 MIR3945-201ENST00000581853 98 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TNFRSF11AQ9Y6Q6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC018630.2-201ENST00000534866 2403 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 Y_RNA.114-201ENST00000363265 113 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-1292P-201ENST00000383856 107 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-429P-201ENST00000384582 108 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR561-201ENST00000385216 97 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 Y_RNA.617-201ENST00000410920 90 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC018634.1-201ENST00000437554 401 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU7-149P-201ENST00000516739 59 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC133485.4-201ENST00000561835 220 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC138907.4-201ENST00000570107 226 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR3616-201ENST00000584070 92 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC091178.2-201ENST00000584401 117 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC007229.1-201ENST00000590455 412 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL670379.3-201ENST00000605040 251 ntBASIC3.33□□□□□ -1.88
TNFRSF11AQ9Y6Q6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 Y_RNA.346-201ENST00000365385 112 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR891A-201ENST00000401237 79 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL353689.1-201ENST00000438895 199 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU5E-3P-201ENST00000515913 68 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 Y_RNA.690-201ENST00000516603 95 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC107016.2-201ENST00000547968 190 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR3199-1-201ENST00000582434 88 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TNFRSF11AQ9Y6Q6 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR515-2-201ENST00000384883 83 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR515-1-201ENST00000384884 83 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-965P-201ENST00000516721 96 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-1096P-201ENST00000517089 102 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC002064.3-201ENST00000623448 346 ntBASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TNFRSF11AQ9Y6Q6 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR449A-201ENST00000362113 91 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-235P-201ENST00000362644 107 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SNORD24-201ENST00000383884 75 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 HMGN1P7-201ENST00000491722 313 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 RNU6-113P-201ENST00000516653 101 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL353149.1-201ENST00000610667 244 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MIR6129-201ENST00000616087 109 ntBASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TNFRSF11AQ9Y6Q6 Y_RNA.91-201ENST00000363042 107 ntBASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SNORA40.5-201ENST00000391061 128 ntBASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 SNORA48.8-201ENST00000391324 134 ntBASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 MLLT10P1-201ENST00000418346 262 ntBASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 AL449363.1-201ENST00000617815 186 ntBASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
TNFRSF11AQ9Y6Q6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms