Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 Y_RNA.336-201ENST00000365307 109 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.351-201ENST00000365436 96 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 MTATP8P2-201ENST00000435212 202 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 RPL39P25-201ENST00000449384 154 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 AP003327.1-201ENST00000529684 127 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 SNORD115-40-201ENST00000606510 82 ntBASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
HRH3Q9Y5N1 ICE2P2-201ENST00000483823 2787 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 RNU4-36P-201ENST00000364294 144 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR488-201ENST00000365739 83 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.547-201ENST00000384654 119 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR34B-201ENST00000385076 84 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR1912-201ENST00000410389 80 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 SRIP3-201ENST00000413200 219 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 AC087499.4-201ENST00000448505 178 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR4425-201ENST00000580572 84 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR3200-201ENST00000580767 85 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR4305-201ENST00000583252 102 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 MIR4762-201ENST00000585261 75 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 U6.108-201ENST00000637764 58 ntBASIC3.36□□□□□ -1.87
HRH3Q9Y5N1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 MIR302B-201ENST00000362188 73 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 RNU6-268P-201ENST00000364174 107 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 RNVU1-14-201ENST00000384770 164 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 RNU2-48P-201ENST00000410694 191 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 RPL23AP83-201ENST00000434984 473 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 MIR7975-201ENST00000619350 68 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 CTSLP2-204ENST00000629029 392 ntBASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
HRH3Q9Y5N1 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 SNORD9-201ENST00000362566 104 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.93-201ENST00000363066 109 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.99-201ENST00000363138 105 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.107-201ENST00000363190 121 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 U8.5-201ENST00000364528 136 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 Y_RNA.344-201ENST00000365381 112 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RNU6-820P-201ENST00000384273 107 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 MIR450A2-201ENST00000385022 100 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RNA5SP482-201ENST00000391269 118 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RPL21P3-201ENST00000395517 478 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 CST2P1-201ENST00000425770 87 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RPS29P31-201ENST00000446147 164 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 AC006539.3-201ENST00000454258 129 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RNU6-904P-201ENST00000516206 101 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 RNA5SP164-201ENST00000516533 110 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 SNORD45.4-201ENST00000516629 73 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 AP003484.1-201ENST00000530974 250 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 MIR3683-201ENST00000580847 82 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 U3.45-201ENST00000607547 219 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 AL162726.3-218ENST00000636401 95 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 AP000553.6-201ENST00000641242 118 ntBASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.34□□□□□ -1.87
HRH3Q9Y5N1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.34□□□□□ -1.88
HRH3Q9Y5N1 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.34□□□□□ -1.88
HRH3Q9Y5N1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HRH3Q9Y5N1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HRH3Q9Y5N1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
HRH3Q9Y5N1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 Y_RNA.440-201ENST00000384120 114 ntBASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 RNU6-160P-201ENST00000384591 107 ntBASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 RNU7-123P-201ENST00000515911 60 ntBASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 SNORD36C-201ENST00000516733 66 ntBASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HRH3Q9Y5N1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 SNORA80E-201ENST00000384744 137 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 MIR592-201ENST00000384959 97 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 AL627390.1-201ENST00000396055 340 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 SNORA19.1-201ENST00000410656 129 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 AL163195.1-201ENST00000496941 348 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 RNU7-28P-201ENST00000516759 62 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 DEFB131E-201ENST00000532329 154 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 AC007536.1-201ENST00000533382 349 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 FAM71BP1-201ENST00000604431 523 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 MALAT1.1-201ENST00000618249 95 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 AC015726.2-201ENST00000620112 122 ntBASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HRH3Q9Y5N1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HRH3Q9Y5N1 RNA5SP173-201ENST00000364857 136 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms