Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGC4Q9Y5F7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 snoU2-30.2-201ENST00000362805 70 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 Y_RNA.93-201ENST00000363066 109 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU6-1134P-201ENST00000365156 101 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 Y_RNA.342-201ENST00000365352 113 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU6-1104P-201ENST00000384723 104 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 MIR522-201ENST00000385071 87 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 RNA5SP467-201ENST00000391274 118 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 FTH1P12-201ENST00000432137 551 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU7-164P-201ENST00000459221 62 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU7-70P-201ENST00000516941 66 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 AC026421.1-201ENST00000519101 163 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 AL359075.3-201ENST00000613288 217 ntBASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PCDHGC4Q9Y5F7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 AL161788.1-201ENST00000441805 169 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 SCARNA11.3-201ENST00000517276 130 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 AL358944.1-201ENST00000528537 144 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 AC022523.2-201ENST00000561045 150 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 AL590808.1-201ENST00000618696 141 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 GABRG2-229ENST00000641017 3628 ntBASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGC4Q9Y5F7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 Y_RNA.107-201ENST00000363190 121 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 SNORD78.1-201ENST00000390866 65 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC109327.2-201ENST00000448339 378 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 RPL39P25-201ENST00000449384 154 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU7-25P-201ENST00000516544 62 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC091544.4-201ENST00000555268 342 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 MIR4425-201ENST00000580572 84 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 MIR8058-201ENST00000615737 89 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AL021368.2-201ENST00000606125 5352 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 AC017071.1-201ENST00000564407 2204 ntBASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGC4Q9Y5F7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 RNA5SP295-201ENST00000362655 121 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 RNY1P10-201ENST00000363268 113 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 RNY1P6-201ENST00000384193 109 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 AL049830.1-201ENST00000468034 425 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 RNU7-123P-201ENST00000515911 60 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 MIR3163-201ENST00000581592 73 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 AC005000.2-201ENST00000605468 310 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 AC110079.1-202ENST00000635213 138 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 AL162726.3-218ENST00000636401 95 ntBASIC3.34□□□□□ -1.87
PCDHGC4Q9Y5F7 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.88
PCDHGC4Q9Y5F7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGC4Q9Y5F7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGC4Q9Y5F7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGC4Q9Y5F7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 Y_RNA.37-201ENST00000362606 108 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 SNORD115-28-201ENST00000363931 81 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 Y_RNA.219-201ENST00000364232 113 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 RNU1-133P-201ENST00000364867 167 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 AC009238.1-201ENST00000442165 424 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 AC009237.6-201ENST00000446969 424 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 RNU6-1041P-201ENST00000516254 102 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 DEFB131E-201ENST00000532329 154 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 AC006441.5-201ENST00000612680 209 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 U6.108-201ENST00000637764 58 ntBASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
PCDHGC4Q9Y5F7 SNORA1B-201ENST00000362535 133 ntBASIC3.32□□□□□ -1.88
PCDHGC4Q9Y5F7 RNU1-23P-201ENST00000363361 144 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms