Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORD31B-201ENST00000364977 69 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 Y_RNA.432-201ENST00000384087 111 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 RNU6-1064P-201ENST00000410626 104 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC063976.3-201ENST00000426849 329 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 RNU7-26P-201ENST00000458980 63 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 RPL36AP21-201ENST00000490372 323 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC025647.1-201ENST00000517879 253 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC015720.1-201ENST00000565251 277 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 AC090115.4-201ENST00000609970 188 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
RNF38Q9H0F5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RNF38Q9H0F5 Z82209.1-201ENST00000422141 2135 ntBASIC2.89□□□□□ -1.95
RNF38Q9H0F5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
RNF38Q9H0F5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RNF38Q9H0F5 MIR449A-201ENST00000362113 91 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 U8.1-201ENST00000362843 134 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RNU6-438P-201ENST00000365561 103 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RNU6-597P-201ENST00000365620 102 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RNA5SP492-201ENST00000411330 114 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 AC016909.1-201ENST00000415916 166 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.88□□□□□ -1.95
RNF38Q9H0F5 AC010531.2-201ENST00000465012 153 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RN7SKP179-201ENST00000516126 217 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RNU6-197P-201ENST00000516680 100 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 AC090049.2-201ENST00000550377 109 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RNF38Q9H0F5 MTND5P34-201ENST00000568888 325 ntBASIC2.88□□□□□ -1.95
RNF38Q9H0F5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
RNF38Q9H0F5 RNU6-834P-201ENST00000362367 110 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 RNU6-674P-201ENST00000363831 107 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 RNU6-743P-201ENST00000364151 106 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 RNU6-476P-201ENST00000384726 107 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 RNA5SP496-201ENST00000391240 109 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF38Q9H0F5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
RNF38Q9H0F5 AC245047.4-201ENST00000433189 144 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 RNU6-948P-201ENST00000516374 107 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 AL021707.8-201ENST00000609428 183 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 U4atac.1-201ENST00000618345 95 ntBASIC2.87□□□□□ -1.95
RNF38Q9H0F5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.87□□□□□ -1.95
RNF38Q9H0F5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RNF38Q9H0F5 AL136360.1-201ENST00000503377 1900 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-978P-201ENST00000364371 103 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 SNORA25.7-201ENST00000364375 127 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-484P-201ENST00000384016 107 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-1072P-201ENST00000384703 107 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 Y_RNA.563-201ENST00000384707 108 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-443P-201ENST00000384780 107 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNA5SP21-201ENST00000410917 96 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 AL158823.1-201ENST00000418441 478 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 AC010154.1-201ENST00000425857 269 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 AC016925.1-201ENST00000458303 298 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 PDCD5P2-201ENST00000507570 312 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-772P-201ENST00000516042 105 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RNU6-1299P-201ENST00000516316 100 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 RPL23AP91-201ENST00000569211 455 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 Y_RNA.757-201ENST00000578934 114 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 ZNF861P-201ENST00000588126 639 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 MIR1248-201ENST00000629190 106 ntBASIC2.86□□□□□ -1.95
RNF38Q9H0F5 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
RNF38Q9H0F5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.86□□□□□ -1.95
RNF38Q9H0F5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 Y_RNA.91-201ENST00000363042 107 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 SNORA38-201ENST00000363946 132 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 RNU6-117P-201ENST00000365415 107 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 RNY4P18-201ENST00000391107 89 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 AC003982.1-202ENST00000469928 248 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 RNU5E-3P-201ENST00000515913 68 ntBASIC2.85□□□□□ -1.95
RNF38Q9H0F5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RNF38Q9H0F5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RNF38Q9H0F5 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RNU6-1240P-201ENST00000365155 104 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 SNORA72-201ENST00000384339 132 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RNU6-1235P-201ENST00000384559 107 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RNU2-70P-201ENST00000410718 179 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 MLLT10P1-201ENST00000418346 262 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 AC008134.1-201ENST00000420943 193 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 AC009238.1-201ENST00000442165 424 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RPS4XP11-201ENST00000446897 772 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 AC009237.6-201ENST00000446969 424 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 HMGN2P18-201ENST00000450680 270 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RNU6-498P-201ENST00000459468 107 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 RNA5SP490-201ENST00000517141 136 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 MIR4438-201ENST00000585271 93 ntBASIC2.84□□□□□ -1.95
RNF38Q9H0F5 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF38Q9H0F5 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RNF38Q9H0F5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms