Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RNA5SP42-201ENST00000364278 115 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 Y_RNA.316-201ENST00000365118 111 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 Y_RNA.440-201ENST00000384120 114 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.3□□□□□ -1.72
NBPF3Q9H094 RNU1-61P-201ENST00000516107 151 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 AC002984.1-201ENST00000591692 448 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 AC095038.3-201ENST00000634439 195 ntBASIC4.3□□□□□ -1.72
NBPF3Q9H094 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NBPF3Q9H094 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NBPF3Q9H094 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NBPF3Q9H094 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NBPF3Q9H094 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NBPF3Q9H094 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NBPF3Q9H094 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NBPF3Q9H094 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NBPF3Q9H094 Y_RNA.37-201ENST00000362606 108 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 RNU6-679P-201ENST00000391003 106 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 Y_RNA.607-201ENST00000410597 98 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 SNORD105B-201ENST00000458770 79 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 AC006445.1-201ENST00000491925 405 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.29□□□□□ -1.72
NBPF3Q9H094 AL110115.1-201ENST00000614396 364 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 MIR6852-201ENST00000621699 66 ntBASIC4.29□□□□□ -1.72
NBPF3Q9H094 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NBPF3Q9H094 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.29□□□□□ -1.72
NBPF3Q9H094 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NBPF3Q9H094 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NBPF3Q9H094 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.28□□□□□ -1.72
NBPF3Q9H094 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NBPF3Q9H094 MIR126-201ENST00000362291 85 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 SNORD115-28-201ENST00000363931 81 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 RNU6-743P-201ENST00000364151 106 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 MIR802-201ENST00000390235 94 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 SNORA7.5-201ENST00000410672 110 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.28□□□□□ -1.72
NBPF3Q9H094 RN7SKP83-201ENST00000516512 178 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 AC091932.4-201ENST00000623386 200 ntBASIC4.28□□□□□ -1.72
NBPF3Q9H094 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
NBPF3Q9H094 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NBPF3Q9H094 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NBPF3Q9H094 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.27□□□□□ -1.73
NBPF3Q9H094 RNU6-509P-201ENST00000363519 107 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 Y_RNA.242-201ENST00000364473 110 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 RNA5SP120-201ENST00000410900 112 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 RPL32P35-201ENST00000415214 394 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.27□□□□□ -1.73
NBPF3Q9H094 RPS23P4-201ENST00000487908 423 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 AC087685.1-201ENST00000587507 141 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 AC090115.4-201ENST00000609970 188 ntBASIC4.27□□□□□ -1.73
NBPF3Q9H094 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NBPF3Q9H094 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NBPF3Q9H094 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
NBPF3Q9H094 RNU6-1229P-201ENST00000364295 107 ntBASIC4.26□□□□□ -1.73
NBPF3Q9H094 Y_RNA.351-201ENST00000365436 96 ntBASIC4.26□□□□□ -1.73
NBPF3Q9H094 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.26□□□□□ -1.73
NBPF3Q9H094 CYCSP4-201ENST00000429682 331 ntBASIC4.26□□□□□ -1.73
NBPF3Q9H094 AL359075.3-201ENST00000613288 217 ntBASIC4.26□□□□□ -1.73
NBPF3Q9H094 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.26□□□□□ -1.73
NBPF3Q9H094 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NBPF3Q9H094 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NBPF3Q9H094 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
NBPF3Q9H094 SNORA38.1-201ENST00000364172 131 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 RNU6-1274P-201ENST00000384557 107 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 RNU6-1186P-201ENST00000410429 97 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.25□□□□□ -1.73
NBPF3Q9H094 AC025750.2-201ENST00000442609 450 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 SNORA18.7-201ENST00000516910 131 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 ELOCP29-201ENST00000588193 334 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 U4atac.1-201ENST00000618345 95 ntBASIC4.25□□□□□ -1.73
NBPF3Q9H094 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.25□□□□□ -1.73
NBPF3Q9H094 AP003122.5-201ENST00000527668 3766 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NBPF3Q9H094 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NBPF3Q9H094 RNU6-438P-201ENST00000365561 103 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 Y_RNA.547-201ENST00000384654 119 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 RNU2-40P-201ENST00000410833 196 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 AL512326.2-201ENST00000426359 151 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 AL445646.1-201ENST00000431784 216 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 RNU6-1006P-201ENST00000516998 103 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 AF117829.1-206ENST00000621883 3802 ntBASIC4.24□□□□□ -1.73
NBPF3Q9H094 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NBPF3Q9H094 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
NBPF3Q9H094 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NBPF3Q9H094 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
NBPF3Q9H094 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NBPF3Q9H094 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
NBPF3Q9H094 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.23□□□□□ -1.73
NBPF3Q9H094 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NBPF3Q9H094 SNORD116-10-201ENST00000363791 102 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 Y_RNA.377-201ENST00000365644 108 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 RNU6-1201P-201ENST00000384227 107 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 RNU4-69P-201ENST00000410677 143 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 SNX2P2-201ENST00000424553 323 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 UBE2DNL-203ENST00000474922 222 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 RPL23AP63-201ENST00000498752 471 ntBASIC4.23□□□□□ -1.73
NBPF3Q9H094 RNU2-34P-201ENST00000516534 121 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms