Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AC007012.1-201ENST00000567192 175 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 MIR5582-201ENST00000579697 68 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 AL137067.1-201ENST00000615933 120 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 AL591926.4-201ENST00000616895 298 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 U6.108-201ENST00000637764 58 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 AC008264.2-201ENST00000610193 3731 ntBASIC3.37□□□□□ -1.87
PHACTR1Q9C0D0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 SNORA63.1-201ENST00000362493 131 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 SNORA5A-201ENST00000384111 134 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 MIR592-201ENST00000384959 97 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 RPL21P3-201ENST00000395517 478 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 COX6CP6-201ENST00000490840 228 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 Y_RNA.677-201ENST00000516401 85 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 RNU6-667P-201ENST00000517186 102 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 AC022217.4-201ENST00000604389 163 ntBASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
PHACTR1Q9C0D0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 RNU1-70P-201ENST00000362618 164 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 RNU6-1107P-201ENST00000364817 104 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 MIR518F-201ENST00000384973 87 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 SNORD17-201ENST00000390930 237 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 FTH1P12-201ENST00000432137 551 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 RPS29P12-201ENST00000460178 152 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 RNU6-537P-201ENST00000517277 103 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 AC012314.7-201ENST00000619693 93 ntBASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.35□□□□□ -1.87
PHACTR1Q9C0D0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 Y_RNA.85-201ENST00000363014 111 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 Y_RNA.366-201ENST00000365540 102 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 MIR522-201ENST00000385071 87 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 RNU6-554P-201ENST00000410466 106 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 SRIP3-201ENST00000413200 219 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 AP002004.2-201ENST00000531656 154 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 AC091544.4-201ENST00000555268 342 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 MIR5197-201ENST00000583721 112 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 AC106754.2-201ENST00000623006 233 ntBASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.34□□□□□ -1.87
PHACTR1Q9C0D0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.88
PHACTR1Q9C0D0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
PHACTR1Q9C0D0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.34□□□□□ -1.88
PHACTR1Q9C0D0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PHACTR1Q9C0D0 U8.9-201ENST00000365667 134 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 SNORD12C-201ENST00000386307 89 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 MIR802-201ENST00000390235 94 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 RNA5SP323-201ENST00000391094 133 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 SNORA26.7-201ENST00000391288 122 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 PRSS3P4-201ENST00000453323 162 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 RNU7-94P-201ENST00000459576 63 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AL049830.1-201ENST00000468034 425 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AC018868.1-201ENST00000491307 315 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 IGKV2-26-201ENST00000518305 343 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 AC009093.8-201ENST00000641769 292 ntBASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHACTR1Q9C0D0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 SNORA1B-201ENST00000362535 133 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 Y_RNA.99-201ENST00000363138 105 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 Y_RNA.369-201ENST00000365568 117 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 SNORA46-201ENST00000384762 135 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 MIR515-2-201ENST00000384883 83 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 MIR515-1-201ENST00000384884 83 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 RNU1-131P-201ENST00000458943 161 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 RN7SL636P-201ENST00000497504 294 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 AC007536.1-201ENST00000533382 349 ntBASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PHACTR1Q9C0D0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 SNORA8-201ENST00000384574 139 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 RNU6-220P-201ENST00000390919 107 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 AC003685.2-201ENST00000422795 395 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 RPS26P48-201ENST00000491713 339 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 AC026403.1-201ENST00000518938 295 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 AC024995.1-201ENST00000523014 93 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 AC134878.1-201ENST00000619901 243 ntBASIC3.31□□□□□ -1.88
PHACTR1Q9C0D0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms