Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 MIR1267-201ENST00000408723 78 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 TRIAP1P1-201ENST00000427062 225 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 AC017083.1-201ENST00000428093 483 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 RNU2-27P-201ENST00000516185 142 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 SNORA70.18-201ENST00000516696 98 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 MIR548AE2-201ENST00000583456 67 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.28□□□□□ -1.72
MS4A4AQ96JQ5 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 SNORA22.1-201ENST00000362701 134 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 SNORA1.2-201ENST00000365189 134 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 AC245047.3-201ENST00000429428 127 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 RNA5SP208-201ENST00000516156 78 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 AC007536.1-201ENST00000533382 349 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 SNORA28-201ENST00000606769 126 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 AC027279.3-201ENST00000625055 122 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 AC110079.1-202ENST00000635213 138 ntBASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MS4A4AQ96JQ5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 AC139713.2-215ENST00000641428 5037 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 Y_RNA.99-201ENST00000363138 105 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 RNU2-48P-201ENST00000410694 191 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 AC114811.1-201ENST00000507207 168 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 SNORA31.4-201ENST00000516049 129 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 AC103810.7-201ENST00000607821 91 ntBASIC4.26□□□□□ -1.73
MS4A4AQ96JQ5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 Y_RNA.94-201ENST00000363068 106 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 SNORA38.1-201ENST00000364172 131 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 RNA5SP424-201ENST00000390988 115 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 AC090844.1-201ENST00000422019 156 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 TRBV12-1-201ENST00000479785 344 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 RPL23AP94-201ENST00000512518 302 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 RNU7-53P-201ENST00000516705 60 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 MIR376B-201ENST00000614515 100 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 MIR7112-201ENST00000616126 65 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 AL591424.2-201ENST00000617023 128 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 MIR6852-201ENST00000621699 66 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 AC017071.1-201ENST00000564407 2204 ntBASIC4.25□□□□□ -1.73
MS4A4AQ96JQ5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 RNA5SP322-201ENST00000363617 119 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 RNU6-160P-201ENST00000384591 107 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 MIR889-201ENST00000401280 79 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 Y_RNA.609-201ENST00000410669 89 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 MIR4513-201ENST00000581077 86 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 AL355297.2-201ENST00000604792 129 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 MIR7515-201ENST00000637837 67 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 AP000553.6-201ENST00000641242 118 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 LINC01355-201ENST00000566551 5444 ntBASIC4.24□□□□□ -1.73
MS4A4AQ96JQ5 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 RNU4-35P-201ENST00000362588 141 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 SNORD38.1-201ENST00000363863 68 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 AC025518.1-201ENST00000479856 347 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 DNAJC19P9-201ENST00000555084 351 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 MIR7851-201ENST00000610611 160 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 SNORD3E-202ENST00000627253 216 ntBASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.23□□□□□ -1.73
MS4A4AQ96JQ5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 Y_RNA.470-201ENST00000384307 117 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 SNORD17-201ENST00000390930 237 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 RNU6-1328P-201ENST00000410938 106 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 AL445685.2-201ENST00000422551 342 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 AL161932.1-201ENST00000437408 146 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 HLA-N-201ENST00000437516 135 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 AC069257.2-201ENST00000441819 155 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 AC025554.1-201ENST00000505641 188 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 RNU6-667P-201ENST00000517186 102 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 RNU6-711P-201ENST00000517255 106 ntBASIC4.22□□□□□ -1.73
MS4A4AQ96JQ5 CYP4A43P-201ENST00000568156 121 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms