Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 AC008885.1-201ENST00000514930 301 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 RNA5SP76-201ENST00000516277 87 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 Y_RNA.757-201ENST00000578934 114 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 AC097639.2-201ENST00000603159 172 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 AC005000.2-201ENST00000605468 310 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 U6.73-201ENST00000619194 103 ntBASIC2.57□□□□□ -2
NEIL1Q96FI4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.57□□□□□ -2
NEIL1Q96FI4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.57□□□□□ -2
NEIL1Q96FI4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEIL1Q96FI4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.56□□□□□ -2
NEIL1Q96FI4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.56□□□□□ -2
NEIL1Q96FI4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NEIL1Q96FI4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NEIL1Q96FI4 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 Y_RNA.120-201ENST00000363304 110 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 RNU6-153P-201ENST00000364422 104 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 RNU6-429P-201ENST00000384582 108 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 MIR562-201ENST00000384894 95 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 MIR128-1-201ENST00000384921 82 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 RNA5SP274-201ENST00000410484 108 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 AC023449.1-201ENST00000454464 154 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 RPS29P21-201ENST00000496272 170 ntBASIC2.56□□□□□ -2
NEIL1Q96FI4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NEIL1Q96FI4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.55□□□□□ -2
NEIL1Q96FI4 Y_RNA.111-201ENST00000363248 100 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 Y_RNA.280-201ENST00000364765 112 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 MIR23A-201ENST00000385245 73 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 SNORA48.2-201ENST00000390926 124 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 MIR1253-201ENST00000408273 105 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 AC060773.1-201ENST00000421698 310 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 AC022018.1-201ENST00000430685 241 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
NEIL1Q96FI4 RNU7-149P-201ENST00000516739 59 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.55□□□□□ -2
NEIL1Q96FI4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.55□□□□□ -2
NEIL1Q96FI4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.55□□□□□ -2
NEIL1Q96FI4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
NEIL1Q96FI4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.54□□□□□ -2
NEIL1Q96FI4 RNU6-476P-201ENST00000384726 107 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 MLLT10P1-201ENST00000418346 262 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 HMGN2P34-201ENST00000437647 269 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.54□□□□□ -2
NEIL1Q96FI4 RNU6-772P-201ENST00000516042 105 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 RN7SKP43-201ENST00000516173 320 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 Y_RNA.692-201ENST00000516627 105 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 AC007536.1-201ENST00000533382 349 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 MIR3126-201ENST00000577443 74 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 AC131055.1-201ENST00000584626 316 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 MIR3914-2-201ENST00000637339 95 ntBASIC2.54□□□□□ -2
NEIL1Q96FI4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
NEIL1Q96FI4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NEIL1Q96FI4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
NEIL1Q96FI4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.53□□□□□ -2
NEIL1Q96FI4 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.53□□□□□ -2
NEIL1Q96FI4 RNU1-96P-201ENST00000364163 162 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.53□□□□□ -2
NEIL1Q96FI4 RPL39P40-201ENST00000445481 146 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 S100A11P2-201ENST00000467589 312 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 OR9P1P-201ENST00000496431 281 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 RNU6-667P-201ENST00000517186 102 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 RNU2-60P-201ENST00000517290 128 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 AC107016.2-201ENST00000547968 190 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 MIR6129-201ENST00000616087 109 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 Pinc.1-201ENST00000616452 154 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
NEIL1Q96FI4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
NEIL1Q96FI4 AL161431.1-201ENST00000618966 4205 ntBASIC2.53□□□□□ -2.01
NEIL1Q96FI4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
NEIL1Q96FI4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 MIR520G-201ENST00000385064 90 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 SNORA40.5-201ENST00000391061 128 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 RNY4P18-201ENST00000391107 89 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 SNORA26-201ENST00000391286 122 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AL158147.1-201ENST00000443970 75 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 AC026271.5-201ENST00000577873 130 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 MIR3121-201ENST00000579680 77 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 JPX_2.1-201ENST00000614161 69 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.52□□□□□ -2.01
NEIL1Q96FI4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NEIL1Q96FI4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NEIL1Q96FI4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
NEIL1Q96FI4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.51□□□□□ -2.01
NEIL1Q96FI4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.51□□□□□ -2.01
NEIL1Q96FI4 SNORA54-201ENST00000384281 123 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms