Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 Y_RNA.253-201ENST00000364562 112 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 RNU6-234P-201ENST00000365229 104 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 Y_RNA.377-201ENST00000365644 108 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 SNORD38C-201ENST00000384381 69 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 Y_RNA.714-201ENST00000517065 90 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 AC110741.2-201ENST00000605278 268 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 AC022149.2-201ENST00000621061 203 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 AC006386.2-201ENST00000624491 75 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 AC012005.1-201ENST00000624575 75 ntBASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.11□□□□□ -1.75
NKX2-3Q8TAU0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 Y_RNA.95-201ENST00000363079 95 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 RNU1-96P-201ENST00000364163 162 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 AP000567.1-201ENST00000406413 156 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 Y_RNA.621-201ENST00000411065 96 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 AC104984.5-201ENST00000586878 94 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 AC073413.2-201ENST00000604332 360 ntBASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
NKX2-3Q8TAU0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 MIR423-201ENST00000362201 94 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 RNA5SP295-201ENST00000362655 121 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 RNU4-67P-201ENST00000364569 141 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 RNA5SP38-201ENST00000410750 119 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 AC010401.1-201ENST00000463867 348 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 RN7SL594P-201ENST00000470590 287 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 RPL36AP48-201ENST00000485521 314 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 MIR5680-201ENST00000577577 84 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 AC013412.1-201ENST00000610687 192 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 AL162274.2-201ENST00000614406 332 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 AC006111.3-201ENST00000622137 383 ntBASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NKX2-3Q8TAU0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
NKX2-3Q8TAU0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.09□□□□□ -1.76
NKX2-3Q8TAU0 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 RNU11-5P-201ENST00000391216 129 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.611-201ENST00000410682 108 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 RHEBP3-201ENST00000411920 351 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 RNU7-80P-201ENST00000459562 61 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 ZNF271P-202ENST00000465539 1970 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 PHBP14-201ENST00000512887 367 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 SCGB1D5P-201ENST00000515134 247 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 MIR449C-201ENST00000516047 92 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 MIR2276-201ENST00000516886 89 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 uc_338.14-201ENST00000613162 166 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 MIR203B-201ENST00000636080 86 ntBASIC4.08□□□□□ -1.76
NKX2-3Q8TAU0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.4-201ENST00000362333 112 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.94-201ENST00000363068 106 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 SNORD116-10-201ENST00000363791 102 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.440-201ENST00000384120 114 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 RPS12P18-201ENST00000442381 270 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 SNRPGP3-201ENST00000469405 227 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 AC012531.5-201ENST00000611375 151 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 AC006441.5-201ENST00000612680 209 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 MIR1255B1-201ENST00000636325 63 ntBASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-3Q8TAU0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 Y_RNA.37-201ENST00000362606 108 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 RNA5SP374-201ENST00000362939 125 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 SNORD115-28-201ENST00000363931 81 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR605-201ENST00000385078 83 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR548O-201ENST00000408583 114 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR1183-201ENST00000408856 89 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 AL358944.1-201ENST00000528537 144 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR5004-201ENST00000579078 107 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR4276-201ENST00000584832 70 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 MIR548BB-201ENST00000626714 66 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 AC244205.2-202ENST00000635781 342 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 AC091304.10-201ENST00000641554 121 ntBASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NKX2-3Q8TAU0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 RNU6-509P-201ENST00000363519 107 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 SNORA80A-201ENST00000363922 136 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 RNU2-40P-201ENST00000410833 196 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 FTH1P12-201ENST00000432137 551 ntBASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-3Q8TAU0 RPS23P4-201ENST00000487908 423 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms