Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RNU7-197P-201ENST00000458836 62 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 RNU6-498P-201ENST00000459468 107 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 AC010531.2-201ENST00000465012 153 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 RPL36AP21-201ENST00000490372 323 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 RPS29P21-201ENST00000496272 170 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 AL031274.2-201ENST00000599419 203 ntBASIC2.84□□□□□ -1.95
NKX3-2P78367 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
NKX3-2P78367 Z82209.1-201ENST00000422141 2135 ntBASIC2.84□□□□□ -1.96
NKX3-2P78367 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
NKX3-2P78367 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX3-2P78367 Y_RNA.218-201ENST00000364218 104 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RNU6-117P-201ENST00000365415 107 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 Y_RNA.420-201ENST00000384043 110 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RNU2-32P-201ENST00000411193 191 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 CYCSP49-201ENST00000420810 319 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.83□□□□□ -1.96
NKX3-2P78367 AL356320.1-201ENST00000429616 163 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RNU6-437P-201ENST00000459408 95 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RPPH1-2P-201ENST00000516688 293 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 RNA5SP490-201ENST00000517141 136 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
NKX3-2P78367 AC015720.1-201ENST00000565251 277 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NKX3-2P78367 AC080128.1-201ENST00000474389 1917 ntBASIC2.83□□□□□ -1.96
NKX3-2P78367 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NKX3-2P78367 AC092881.1-201ENST00000638218 2733 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RNU1-23P-201ENST00000363361 144 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 SNORD45.3-201ENST00000363836 72 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RNU6-546P-201ENST00000383991 107 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RN7SKP223-201ENST00000410582 62 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RPL39P40-201ENST00000445481 146 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 SNRPGP8-201ENST00000454064 226 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 AC080013.2-201ENST00000460866 323 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 AC092991.1-201ENST00000477176 376 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RPS27P22-201ENST00000478056 241 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 RNU7-116P-201ENST00000516940 62 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 IGKV3-31-201ENST00000523109 329 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.82□□□□□ -1.96
NKX3-2P78367 MIR7843-201ENST00000622274 79 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 MIR7157-201ENST00000635801 60 ntBASIC2.82□□□□□ -1.96
NKX3-2P78367 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
NKX3-2P78367 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
NKX3-2P78367 CENPCP1-201ENST00000533085 2578 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 RNU6-1240P-201ENST00000365155 104 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 MIR181B1-201ENST00000385240 110 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 RNU6-460P-201ENST00000391158 108 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 Y_RNA.587-201ENST00000391210 103 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 RNU6-1211P-201ENST00000459179 105 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 RN7SL636P-201ENST00000497504 294 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 RNU6-1234P-201ENST00000516877 103 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 MIR4648-201ENST00000580107 72 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 AL929325.1-201ENST00000603096 117 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 MIR6844-201ENST00000637122 62 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 AP006437.1-201ENST00000641440 3685 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
NKX3-2P78367 AC009487.2-201ENST00000420969 6821 ntBASIC2.81□□□□□ -1.96
NKX3-2P78367 AC009487.4-201ENST00000624969 3585 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX3-2P78367 Y_RNA.71-201ENST00000362892 104 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 RNU6-674P-201ENST00000363831 107 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 RNA5SP456-201ENST00000364002 114 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 RNU4-41P-201ENST00000364426 143 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 SNORD50B-201ENST00000364995 70 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.8□□□□□ -1.96
NKX3-2P78367 RNY3P5-201ENST00000384127 102 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 Y_RNA.521-201ENST00000384560 114 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 RNU6-588P-201ENST00000410281 105 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 RNU4-43P-201ENST00000410628 137 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 AC008134.1-201ENST00000420943 193 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 AC008267.6-201ENST00000441664 139 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 MTCO1P44-201ENST00000441935 243 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX3-2P78367 MIR5739-201ENST00000619803 80 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 AC006435.5-201ENST00000624486 112 ntBASIC2.8□□□□□ -1.96
NKX3-2P78367 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
NKX3-2P78367 RNU4-13P-201ENST00000364019 141 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 MIR627-201ENST00000384979 97 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 RN7SKP101-201ENST00000411376 320 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX3-2P78367 AL161788.1-201ENST00000441805 169 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 RPS27P1-201ENST00000450552 247 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 MIR3117-201ENST00000584034 78 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX3-2P78367 AL021707.8-201ENST00000609428 183 ntBASIC2.79□□□□□ -1.96
NKX3-2P78367 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
NKX3-2P78367 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NKX3-2P78367 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX3-2P78367 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX3-2P78367 MAPK10-266ENST00000641066 6555 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 RNU1-22P-201ENST00000363334 158 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 Y_RNA.393-201ENST00000383936 102 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 MIR95-201ENST00000385072 81 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 RNU2-48P-201ENST00000410694 191 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX3-2P78367 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms