Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP4BP1P59074 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHMP4BP1P59074 RNU6-859P-201ENST00000362728 107 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 RNU6-1290P-201ENST00000362957 109 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 RNU1-22P-201ENST00000363334 158 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 RNU6-271P-201ENST00000363858 105 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 RNU6-437P-201ENST00000459408 95 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 AC092991.1-201ENST00000477176 376 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 RNU6-971P-201ENST00000516920 106 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 MIR548AI-201ENST00000579940 88 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 CENPCP1-201ENST00000533085 2578 ntBASIC3.1□□□□□ -1.91
CHMP4BP1P59074 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHMP4BP1P59074 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.09□□□□□ -1.91
CHMP4BP1P59074 AC096644.4-201ENST00000563417 2912 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHMP4BP1P59074 SNORD45.3-201ENST00000363836 72 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 Y_RNA.261-201ENST00000364631 102 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RNU6-1240P-201ENST00000365155 104 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RNU6-1336P-201ENST00000383886 109 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RNU6-735P-201ENST00000410612 107 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RN7SKP101-201ENST00000411376 320 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 SRIP3-201ENST00000413200 219 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 AC123900.1-201ENST00000420390 96 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 AC060773.1-201ENST00000421698 310 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RPS4XP11-201ENST00000446897 772 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 RPS27P22-201ENST00000478056 241 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.09□□□□□ -1.91
CHMP4BP1P59074 MIR4658-201ENST00000584344 65 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
CHMP4BP1P59074 Y_RNA.542-201ENST00000384641 111 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 RNU6-1168P-201ENST00000390831 104 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.08□□□□□ -1.92
CHMP4BP1P59074 AC074290.1-201ENST00000448883 135 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 SNORA4.4-201ENST00000515921 135 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 RNU6-479P-201ENST00000516348 105 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 RNU6-826P-201ENST00000516827 104 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 U2.20-201ENST00000613956 192 ntBASIC3.08□□□□□ -1.92
CHMP4BP1P59074 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CHMP4BP1P59074 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CHMP4BP1P59074 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU6-674P-201ENST00000363831 107 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 Y_RNA.337-201ENST00000365312 102 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU1-109P-201ENST00000383960 147 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 Y_RNA.420-201ENST00000384043 110 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU1-148P-201ENST00000384472 162 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU6-1081P-201ENST00000384537 107 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 MIR512-1-201ENST00000384913 84 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU6-460P-201ENST00000391158 108 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU4-43P-201ENST00000410628 137 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.07□□□□□ -1.92
CHMP4BP1P59074 AC245102.2-201ENST00000448956 180 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 AC097462.1-201ENST00000514125 324 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 RNU6-856P-201ENST00000516959 98 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 AC112693.2-201ENST00000556538 232 ntBASIC3.07□□□□□ -1.92
CHMP4BP1P59074 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.07□□□□□ -1.92
CHMP4BP1P59074 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CHMP4BP1P59074 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU6-728P-201ENST00000365375 104 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU6-484P-201ENST00000384016 107 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU6-1154P-201ENST00000391001 104 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 Y_RNA.587-201ENST00000391210 103 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 AL512604.1-201ENST00000404812 257 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU6-588P-201ENST00000410281 105 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 SNORA9.3-201ENST00000516383 129 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU6-1234P-201ENST00000516877 103 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 RNU7-128P-201ENST00000517247 62 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 MIR4438-201ENST00000585271 93 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 MIR6715A-201ENST00000615929 79 ntBASIC3.06□□□□□ -1.92
CHMP4BP1P59074 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP4BP1P59074 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.06□□□□□ -1.92
CHMP4BP1P59074 AC009487.4-201ENST00000624969 3585 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 Y_RNA.251-201ENST00000364551 99 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 RNU6-1082P-201ENST00000364574 107 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 MIR1262-201ENST00000408276 93 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 EDDM3CP-201ENST00000415977 425 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 RPL30P13-201ENST00000418873 348 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 AL357134.1-201ENST00000445848 426 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.05□□□□□ -1.92
CHMP4BP1P59074 RNA5SP148-201ENST00000516527 94 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 RNU7-116P-201ENST00000516940 62 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 AC091544.4-201ENST00000555268 342 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 AL049861.1-201ENST00000603130 150 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 MIR6817-201ENST00000615588 66 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 AC006435.5-201ENST00000624486 112 ntBASIC3.05□□□□□ -1.92
CHMP4BP1P59074 RNA5SP68-201ENST00000363885 119 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 RNU4-41P-201ENST00000364426 143 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 SNORA40-201ENST00000388090 126 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 MIR1261-201ENST00000408659 82 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 AC008134.1-201ENST00000420943 193 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 AC096725.1-201ENST00000514266 313 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 RNU2-34P-201ENST00000516534 121 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 AC120024.3-201ENST00000603167 156 ntBASIC3.04□□□□□ -1.92
CHMP4BP1P59074 Y_RNA.99-201ENST00000363138 105 ntBASIC3.03□□□□□ -1.92
CHMP4BP1P59074 SNORA33-201ENST00000363664 130 ntBASIC3.03□□□□□ -1.92
CHMP4BP1P59074 SNORD114-6-201ENST00000364393 72 ntBASIC3.03□□□□□ -1.92
CHMP4BP1P59074 SNORA72-201ENST00000384339 132 ntBASIC3.03□□□□□ -1.92
CHMP4BP1P59074 RNA5SP21-201ENST00000410917 96 ntBASIC3.03□□□□□ -1.92
CHMP4BP1P59074 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms