Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RNF144AP50876 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RNF144AP50876 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF144AP50876 MAPK10-322ENST00000641485 4530 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 RNA5SP124-201ENST00000362739 110 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 Y_RNA.155-201ENST00000363632 101 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF144AP50876 CYCSP19-201ENST00000411715 316 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 SNX2P2-201ENST00000424553 323 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 SNRPGP14-201ENST00000435400 219 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 AL353689.1-201ENST00000438895 199 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 AC087499.4-201ENST00000448505 178 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 CYCSP35-201ENST00000451978 304 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF144AP50876 SNORD45.4-201ENST00000516629 73 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 SNORD59.2-201ENST00000516873 68 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 RNU1-45P-201ENST00000517191 141 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 MIR4762-201ENST00000585261 75 ntBASIC3.38□□□□□ -1.87
RNF144AP50876 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RNF144AP50876 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
RNF144AP50876 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF144AP50876 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNF144AP50876 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF144AP50876 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF144AP50876 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.37□□□□□ -1.87
RNF144AP50876 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-242P-201ENST00000384359 107 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-813P-201ENST00000384691 107 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-644P-201ENST00000391155 98 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-972P-201ENST00000391208 107 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.37□□□□□ -1.87
RNF144AP50876 AC006989.1-201ENST00000427212 131 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 GOT2P5-201ENST00000433995 546 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-162P-201ENST00000516228 103 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RNU6-795P-201ENST00000516323 103 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 AC002984.1-201ENST00000591692 448 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 U7.3-201ENST00000616123 62 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 AC034229.5-201ENST00000624258 185 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 Z83843.1-201ENST00000604070 3685 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 AC245060.5-201ENST00000610778 3293 ntBASIC3.37□□□□□ -1.87
RNF144AP50876 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RNF144AP50876 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RNF144AP50876 RNU6-283P-201ENST00000364788 107 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 Y_RNA.336-201ENST00000365307 109 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 SNORA4.2-201ENST00000365313 147 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 RNU6-497P-201ENST00000365316 104 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 MIR95-201ENST00000385072 81 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 RNU2-48P-201ENST00000410694 191 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF144AP50876 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF144AP50876 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.36□□□□□ -1.87
RNF144AP50876 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF144AP50876 AL353149.1-201ENST00000610667 244 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 AL121772.2-201ENST00000614331 297 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 AC087741.2-201ENST00000619415 172 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 AC012442.3-202ENST00000636742 206 ntBASIC3.36□□□□□ -1.87
RNF144AP50876 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF144AP50876 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNF144AP50876 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF144AP50876 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
RNF144AP50876 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 U8.5-201ENST00000364528 136 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 SNORA80E-201ENST00000384744 137 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RNF144AP50876 AL627390.1-201ENST00000396055 340 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 RN7SKP200-201ENST00000410564 320 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 RNU6-733P-201ENST00000410759 104 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF144AP50876 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF144AP50876 SNORA48.11-201ENST00000517015 89 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF144AP50876 MIR4694-201ENST00000578534 80 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 MIR3618-201ENST00000580330 88 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 AC078899.2-201ENST00000595282 212 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 AC012531.4-201ENST00000616509 177 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 U4.6-201ENST00000621618 127 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 AP000553.6-201ENST00000641242 118 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
RNF144AP50876 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF144AP50876 RNU6-170P-201ENST00000362832 104 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 RNU6-832P-201ENST00000363319 107 ntBASIC3.34□□□□□ -1.87
RNF144AP50876 RNA5SP387-201ENST00000364226 106 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms